Detailed information on CNT30314174


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30523111Camelina sativaSetaria italica24.211.2188.6853forward
CNT30375740Camelina sativaArabidopsis thaliana75.825.8693.98166forward
CNT30729810Camelina sativaCorchorus capsularis32.422.585.9271forward
CNT3060266Camelina sativaArabidopsis lyrata64.8425.1395.77142forward
CNT30719439Camelina sativaMalus domestica golden32.4210.3387.3271forward
CNT30477502Camelina sativaArabidopsis halleri63.9340.2393.57140forward
CNT30705730Camelina sativaPrunus avium32.4214.8287.3271forward
CNT3022274Camelina sativaPopulus trichocarpa34.2515.486.6775forward
CNT3099734Camelina sativaOryza rufipogon68.0420.8181.21149forward

Expression of CNT30314174

Peptides detected in this lncRNA

>peptide 1 (48 aa)
SDVSFAGYTNRVAEQMTRKVSSSIPKCSYQSDIRNPWTWPRAGCLWDK*

Sequence

>CNT30314174
TCAGTGACGTCTCCTTCGCCGGATACACCAATCGGGTAGCGGAGCAAATGACCAGGAAGGTTTCATCTAGCATTCCCAAGTGTTCGTACCAGAGTGACAT
ACGGAACCCATGGACCTGGCCACGAGCTGGTTGTCTATGGGACAAGTGATGTGGTTGGTAGCCTCCCATTGCTATCTCTGAGTCCCTTGCACCATCCATC
GACCTCTGGTTGATGTTAG