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Detailed information on CNT30313869


BLAST search results

BLAST vs Swiss-Prot:
sp|Q94JQ6|CESA6_ARATH, E-value = 5e-77

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30629098Camelina sativaVigna unguiculata14.1630.2985.34116forward
CNT3028112Camelina sativaTheobroma cacao9.7721.868580forward
CNT30112309Camelina sativaFicus carica19.6651.7783.85161forward

Expression of CNT30313869

Peptides detected in this lncRNA

>peptide 1 (52 aa)
MMTQSAKNNLPKSGPHESYPLLMASEIPTMTPMTFMMRRVVGGMRREVHLKR*

>peptide 2 (65 aa)
MNDDPKCKEQSPEKRSPRVISVADGIRDSNYDSDDVYDEKSRWRDEKRSPFEEVKVRELAVISCF*

Sequence

>CNT30313869
TAACAGAGAAACTCACATATATTTTTTTTTGAAAAAAAATTAAAGTTCTTTATCATAAAAGATTACAGATTGAAACTCCTCTTCTGTAATATTCAAAAGA
GATCAGAAATATTCAATTAAAGAATAATTTGACAAATCTTTTCTCTCACCACCAAAGAACAAAACAAATAGACAACAACCTTCTTTTTTTTCATCTATAT
CTACAACACATTCTTGCAAAAATAACAATCACGTAACAAAATTAATTTCTTTTTTCTTTTTCTTTTTCATCATCTAATGAACACAATGAAGGAGTCTTTT
AGAGGTAAACAATATCTCTCGTACCTCTCTTGATCCGTGGGAATTAAACCTTTTCCACCAATTGATCCATCAATCAAATCACAAGCAGTCTAACCCGCAT
ATCTCGAGAATAGGACCACCTTTCGCCACAAACGGATTAACCCGAACCCAAAGAAGTGTAAGAATAGAGGCGAGGAGGATGGACCAGACAACAATAATGG
TCGGCATTCTATCTTGTTTCCCAAGCAAACCTTTAAGGAATGGGTAAAGATGAATGATGACCCAAAGTGCAAAGAACAATCTCCCGAAAAGCGGTCCCCA
CGAGTCATATCCGTTGCTGATGGCATCAGAGATTCCAACTATGACTCCGATGACGTTTATGATGAGAAGAGTCGTTGGAGGGATGAGAAGAGAAGTCCAT
TTGAAGAGGTAAAGGTCAGAGAACTCGCCGTCATCAGCTGCTTTTGATGTGACTGTGAAGTTAGTGTCCACACCAGCAAGAACCTTGAGGAGACCTTGGA
AGAGAGCAAATAGATGCGC