Detailed information on CNT30313805


BLAST search results

BLAST vs Swiss-Prot:
sp|A4QKQ3|TI214_CAPBU, E-value = 4e-51

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3062643Camelina sativaArabidopsis lyrata97.248.695.1388forward
CNT30262672Camelina sativaBrassica rapa85.714.7892.4342forward

Expression of CNT30313805

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MNRKSRIHAYSYHTETISVSSIKPIAIHTS*

Sequence

>CNT30313805
AAAAAAATCCCTCCTAATTTGTGCATATAGTTGTTTTTAGATACCGTAACTTATTATATATAGTAAAAAGTCTCTATCATTAATGAATCGGAAATCGCGT
ATACATGCGTATTCTTATCATACTGAAACGATTTCCGTTAGTAGTATTAAACCAATAGCGATTCATACAAGCTAAATCTTCTAATCTAAAATTGGGCCAA
AGAAAGGATTTTAAATTAATTAGGTTTTTTTTATCCTTATCAAGATCTTTCTTGTTATGCAAAACTGTGGTCAAGTTTTGAATATTCTTATTAAATCTTG
AATTTCTATCCCTCGCAGTTTTTTTTTTTAAGTTGAAACAAATTAGAATTCGAAATTCTCTACGTCGTTTAGGGGATAGAATTTTTTCAGGGACAAAGA