Detailed information on CNT30313731


BLAST search results

BLAST vs Swiss-Prot:
sp|Q8W4H7|EF1A2_ARATH, E-value = 4e-59

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30228831Camelina sativaAnanas comosus65.1960.8384.82191forward

Expression of CNT30313731

Peptides detected in this lncRNA

>peptide 1 (70 aa)
MMITWEVKLAAPLAGSSLELEATYPLLRSFTATFLTLNPTLSPGSASRRDSWCISTDLTSVVNPVWQSRTG

>peptide 2 (96 aa)
RELDCNVRGVAIEDWGVTVSNLTRVVHDDNLGGEVGSSLGRVILGVGGDIPSLKILHSNILNIEPNIVTGKRLKKRLVVHLNRLDLSGQPCVAIEDW

Sequence

>CNT30313731
AGAGAACTTGACTGCAATGTGAGAGGTGTGGCAATCGAGGACTGGGGCGTAACCGTTTCCAATCTGACCAGGGTGGTTCATGATGATAACCTGGGAGGTG
AAGTTGGCAGCTCCCTTGGCAGGGTCATCCTTGGAGTTGGAGGCGACATACCCTCTCTTAAGATCCTTCACAGCAACATTCTTAACATTGAACCCAACAT
TGTCACCGGGAAGCGCCTCAAGAAGAGACTCGTGGTGCATCTCAACAGACTTGACCTCAGTGGTCAACCCTGTGTGGCAATCGAGGACTGGGG