Detailed information on CNT30313706


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9ASR1|EF2_ARATH, E-value = 8e-58

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30675350Camelina sativaSetaria viridis46.0172.1282150forward
CNT3019597Camelina sativaCitrullus lanatus74.5432.4980.66243forward
CNT30728649Camelina sativaCorchorus capsularis68.7120.5783.04224forward
CNT30143941Camelina sativaMedicago truncatula43.8731.9281.12143forward
CNT30203835Camelina sativaHelianthus annuus22.715.4285.1474forward
CNT30361520Camelina sativaSorghum bicolor53.3725.4483.33174forward
CNT30154011Camelina sativaPrunus persica30.9835.9484.16101forward
CNT3050899Camelina sativaCucumis sativus48.7763.181.76159forward

Expression of CNT30313706

Peptides detected in this lncRNA

>peptide 1 (41 aa)
TTSFPNDQKHTAGMPVLSSWLKRVRRHHFPMIKNTLRECLS*

Sequence

>CNT30313706
GACGACATCATTTCCCAATGATCAAAAACACACTGCGGGAATGCCTGTCCTGAGTTCCTGGCTCAAGAGGGTCAGACGACATCATTTCCCAATGATCAAA
AACACACTGCGGGAATGCCTGTCCTGAGGTTGCTGCCCTAAGCTGAGCCGAGAATCCAAACGACTCCACAACAGGCAGGTACGCCTTGATGTTGTACAGT
GGTGTCCCTGGCCTCTGCATCTCCTCAAAGACGTGTCCTCTCTTCTGATTCAGCACGCTGTAGATTCCTCCAAGAGCTCCCTCTGGTGCCTGGATCTCAA
CCATGTATACAGGCTCCAAAAGTCGG