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Detailed information on CNT30313647


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9SHE8|PSAF_ARATH, E-value = 6e-63

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30629169Camelina sativaVigna unguiculata21.7713.586.9669forward

Expression of CNT30313647

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MKPRKTIRLAKGTSMMISFIAGFFSPLIALK*

>peptide 2 (36 aa)
MNSPQCLWSPFTIKCGKPSDPHNRTSMMISFIAGFFS

>peptide 3 (84 aa)
LSNEIAIDELSVGSNGPNETTEDDPTSQRNIDDDLFHRWFLLATNSSQVASSNPPDPSCNVKEQNPWSNELSPMPLVSVHYQMR*

Sequence

>CNT30313647
CCTTAGCAATGAGATCGCCATTGATGAACTCTCTGTAGGCAGCAACGGGCCAAATGAAACCACGGAAGACGATCCGACTAGCCAAAGGAACATCGATGAT
GATCTCTTTCATCGCTGGTTTCTTCTCGCCACTAATAGCTCTCAAGTAGCTTCTTCCAACCCACCCGATCCATCCTGCAATGTAAAGGAACAGAATCCCT
GGAGTAATGAACTCTCCCCAATGCCTCTGGTCTCCGTTCACTATCAAATGCGGTAAACCATCTGACCCGCACAACAGAACATCGATGATGATCTCTTTCA
TCGCTGGTTTCTTCTCG