Detailed information on CNT30313626


BLAST search results

BLAST vs Swiss-Prot:
sp|Q8VZ87|CB1B_ARATH, E-value = 4e-122

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30514020Camelina sativaJuglans regia18.1323.6286.6209forward
CNT30380511Camelina sativaManihot esculenta30.149.2981.84347forward
CNT30504491Camelina sativaNicotiana attenuata57.7670.2580.93666forward
CNT3091201Camelina sativaSolanum tuberosum55.7764.7581.65643forward
CNT30541860Camelina sativaBrassica napus46.0587.3489.83531forward
CNT30508703Camelina sativaSolanum lycopersicum55.5167.5881.72640forward
CNT30609983Camelina sativaGossypium raimondii32.1846.0983.29371forward
CNT30714756Camelina sativaMalus domestica golden46.7553.181.26539forward
CNT30359492Camelina sativaLactuca sativa48.9265.9682.8564forward
CNT30705057Camelina sativaPrunus avium46.3164.5780.34534forward
CNT30119285Camelina sativaCitrus clementina58.3775.2881.58673forward
CNT30725273Camelina sativaLupinus angustifolius57.8564.7680.51667forward

Expression of CNT30313626

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MAHLLWITSSSRFLANVSGSAESPAVSHP*

>peptide 2 (94 aa)
ERKMSYLINDKSYEVFANLHLKVSNHRPQTQTFSFSSCLSLEFKRLKKRKLQTDKNLAHFPGTKLVAKAHALLLTGSAKWSARFSIGPLPVTMA*

>peptide 3 (97 aa)
MVSKVLYRSLTSDNGLNEESKHGEHSQSSVLKLLHLQLSECLWVGSQTQWVEAASGVKQVLGLSPRDHLQRLCSLQQLPSRSLEWPRSPKCSEHGPS*

>peptide 4 (35 aa)
MENIANLPFLSSFTFNSANASGSVAKPNGSKLPPG*

>peptide 5 (61 aa)
MGCLMVPLAWQQSSSLSHGRFRGLLRPLEKDSQPFRRRQGRREPLLRRPLKCFCFFLFLGD*

Sequence

>CNT30313626
TGAGAGAAAAATGAGTTATTTGATTAATGATAAATCATATGAAGTCTTTGCAAATTTACATCTGAAAGTCTCAAACCATCGACCACAAACACAAACCTTC
TCTTTCTCCTCCTGTCTCTCACTCGAATTCAAAAGACTGAAAAAAAGAAAATTACAAACTGATAAAAACTTGGCTCACTTTCCGGGAACAAAGTTGGTGG
CGAAGGCCCATGCGTTGTTGTTGACTGGATCGGCCAAATGGTCAGCAAGGTTCTCTATCGGTCCCTTACCAGTGACAATGGCTTGAACGAAGAATCCAAA
CATGGAGAACATAGCCAATCTTCCGTTCTTAAGCTCCTTCACCTTCAACTCAGCGAATGCCTCTGGGTCGGTAGCCAAACCCAATGGGTCGAAGCTGCCT
CCGGGGTAAAGCAAGTCCTCGGCCTCTCCCCAAGGGACCATCTCCAGCGACTCTGTAGCCTTCAACAGCTCCCATCAAGATCACTTGAGTGGCCCAGATC
GCCAAAATGCTCTGAGCATGGACCAAGCTAGGGTTTCCCAAGTAATCGAGTCCTCCATCGCTGAAGATTTGTGAACCGGCCTTGAACCAAACCGCCTCTC
CGAACTTGACTCCGTTCCTGGCCAAAAGCTCAGGGAAGACGCAGCCAAGGGCTCCGAGCATGGCCCACCTGCTGTGGATAACTTCTAGCTCACGGTTCCT
TGCGAATGTCTCGGGGTCAGCAGAGAGTCCAGCGGTGTCCCATCCGTAGTCTCCGGGGAACTCTCCGGTAAGGTAGCTTGGTGATTCGCCGGAGAATGGG
CCCAAGTACTTAACTCGGTCGGATCCGTACCATGGGCTGCCTGATGAGTCCGGCGGTGTCCCATCCGTAGTCTCCGGGGAACTCTCCGGTAAGGTAGCTT
GGTGATTCGCCGGAGAATGGGCCCAAGTACTTAACTCGGTCGGATCCGTACCATGGGCTGCCTGATGGTCCCTTTGGCTTGGCAACAGTCTTCCTCATTG
TCACACGGCCGCTTCCGAGGACTTCTGAGGCCGCTGGAGAAAGATTCACAGCCTTTCCGGCGAAGGCAGGGGAGGAGAGAGCCATTGTTGAGGCGGCCAT
TGAAATGTTTTTGTTTTTTTTTATTTTTGGGTGACTAACTTGTGAGTGAGAGT