Detailed information on CNT30312957


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9SHE8|PSAF_ARATH, E-value = 2e-22

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3091235Camelina sativaSolanum tuberosum27.25.4387.6965forward
CNT30611125Camelina sativaArabis alpina87.0323.9182.69208forward
CNT30480106Camelina sativaArabidopsis halleri63.1867.7194.04151forward

Expression of CNT30312957

Peptides detected in this lncRNA

>peptide 1 (78 aa)
CFSLLANCLESLQGVRPEMSATAGMGAERRMEERATAAENAFMDCVRDLLDLGLRTRFVGIVSDIALSSSSDTTRRGLF

Sequence

>CNT30312957
GTTGCTTCTCCCTCTTAGCGAACTGTTTGGAGTCCTTGCAAGGAGTCAGACCTGAGATGTCAGCAACAGCTGGCATGGGAGCTGAGAGGAGGATGGAAGA
GAGGGCGACGGCCGCGGAGAACGCTTTCATGGATTGTGTGAGAGATTTGTTAGATCTCGGGTTGAGAACGAGATTCGTCGGGATCGTGAGCGACATCGCG
CTTTCGAGTTCTTCGGATACTACTAGGAGGGGTTTGTTC