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Detailed information on CNT30312952


BLAST search results

BLAST vs Swiss-Prot:
sp|P35450|EFGC_PEA, E-value = 2e-15

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30547410Camelina sativaIpomoea triloba24.1345.9586.48244forward
CNT30373037Camelina sativaArabidopsis thaliana49.1624.496.38497forward

Expression of CNT30312952

Peptides detected in this lncRNA

>peptide 1 (53 aa)
MQSTTTRAPSVIRRAAVTSEEKSTCPGESIRLMRYSFPSLAPVKLFKEASVIS*

>peptide 2 (35 aa)
DGISILVIKGTFIQILNTVPLGSVGRWQMKNHHLK*

Sequence

>CNT30312952
GATGGCATTAGCATACTTGTCATCAAGGGGACCTTCATACAGATTCTCAACACGGTACCTCTGGGCAGTGTGGGGAGATGGCAAATGAAAAATCATCATC
TCAAGTAGTGCAGTACTGGCAGGGAGCCACGTCTGCATAACACGCTTCATCAAAGGTTTAGCCAACAGTTCCTTCTCATCATTCTTCATCTGGACACCAA
GCTTGGCCAACATAGGCCACAACTTGTCCTTCTGGTCATTCATGCAAGTAGCAATGATTTGCTTGATGGGTTCATAGCAGAACTGGACAAACCCACGCTT
GCAGGTCGCGGAACCAGTGTTTTTGCCAGTCCATTTCCTGGTAGCAGGGTCAAAGAAATTTTCACCCCAAAGCCTCTCCATCATCTTAGACTCATCAACA
CCGAACTTGGAAGCATACATCTTGGCAAAGTTGGTCAGAGTAAACGCCCAACCGTGGAGACCAGCAGAAAACGCAACGGTACCCTTCTCTGGATAAACCT
GAACATCACCAAGGAGAGGATCCTCGTACGTAGCCATAATGACATTAGCATTCTCAATGACCCTCGAGAAAGTCTGGTAAGCCTCCTCACCATCAACCTG
AAGCTCAAGGAAACACCTGTCCATCTTGTTGACAGTCAAGACGGGTCGAATCCTCTCACCAAGAGCCTGACGTAGAACAGTCTCAGTCTGAACACACACA
CCCTCAATGCAGTCGACCACGACAAGAGCACCATCAGTAATACGGAGAGCAGCAGTAACCTCAGAAGAAAAGTCAACATGTCCAGGTGAATCGATAAGGT
TGATGAGGTATTCGTTTCCGTCTCTGGCTCCAGTGAAACTCTTCAAAGAAGCATCAGTCATCTCGTAGTAGAGAGAAATACCAGTGGACTTGATAGTGAT
ACCACGTTCTGCCTCATCAGCTCTGGTATCAGTCATACGAACATCACCAGCAACCTCTTGGGCAATGATACCAGCAGCAGCGACCAAGGAATCAGTGAGA
GTGGATTTCCC