Detailed information on CNT30312764


BLAST search results

BLAST vs Swiss-Prot:
sp|O50008|METE1_ARATH, E-value = 8e-72

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30377828Camelina sativaArabidopsis thaliana59.1564.6493.72223forward
CNT30711924Camelina sativaGlycine max54.9137.786.96207forward
CNT30563287Camelina sativaActinidia chinensis62.3350.6580.43235forward
CNT30129110Camelina sativaCorymbia citriodora59.6857.9983.11225forward
CNT30478263Camelina sativaArabidopsis halleri58.6263.8794.57221forward
CNT30619828Camelina sativaCajanus cajan48.5450.5583.06183forward
CNT3027096Camelina sativaPopulus trichocarpa61.866.9584.98233forward
CNT3049510Camelina sativaCucumis sativus57.5653.7187.1217forward

Expression of CNT30312764

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MPQQGYQRSRSPREHSNQKELIRVQRRQR*

>peptide 2 (55 aa)
MFLPSTTPAKRYFPSGKPALTKSRVLVPRTKSNPKAVTPFNEVRVLYASAGISAK*

Sequence

>CNT30312764
GTTGATTCGAGTTCAGCGTAGGCAGCGGTAAAGTCATTGGCCCAGATGTTCCTTCCGTCAACAACACCAGCAAAGAGGTATTTTCCCTCGGGGAAACCAG
CCTTGACCAAATCAAGGGTCTTGGTGCCACGAACCAAATCAAATCCAAAGGCAGTCACACCCTTCAACGAAGTTAGGGTCTTGTATGCCTCAGCAGGGAT
ATCAGCGAAGTAGGTCTCCACGAGAACATTCAAACCAGAAAGAGTTGATTCGAGTTCAGCGTAGGCAGCGGTAAAGGCCTCGAGTTTGTGGCCCTCAAGA
TCCATAACAAGGACAGGCTCGTCAAGCTGAATCCAGGTGGCACCAGCTGCCTTAAGCTCAGAAATCACTTCCCTGTA