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Detailed information on CNT30312763


BLAST search results

BLAST vs Swiss-Prot:
sp|Q1EC66|UBQ3_ARATH, E-value = 3e-150

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30377520Camelina sativaArabidopsis thaliana50.7475.1590.12759forward
CNT30405422Camelina sativaBeta vulgaris45.0570.4382.94674forward
CNT3061830Camelina sativaArabidopsis lyrata50.5353.8190.48756forward

Expression of CNT30312763

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MVSELSTSRVMVLPVKVLTKICIPPRRRSTR*

>peptide 2 (29 aa)
MLTSEDESLLIRGNSLLVLNLGFDIVNGV*

Sequence

>CNT30312763
CTAATTTCTAATTTTCTAAGGAAACCGATGATTAACATACACTTGGATTATTATTTTACTGAATGTTGAAACACAGGCCCGATTACGAGCCCAACCAAAA
GGTTCATAAGAAATAAAAGAAAAGCAGAAAATATGAAACATGGAACACACAAACTAAACCACGCGAAGATCACCTCCCAAGTGCATTATACTTGAACCAC
CACTTTCAATCAGATCACAACAGCTTAGAAGCTTCCACCACGAAGACGAAGAACCAAGTGAAGAGTTGACTCCTTCTGGATATTGTAATCTGCAAGAGTC
CGACCATCCTCGAGATGCTTACCAGCGAAGATGAGTCTCTGCTGATCCGGGGAAATTCCCTCCTTGTCCTGAATCTTGGCTTTGACATTGTCAATGGTGT
CTGAACTCTCAACCTCGAGGGTGATGGTTTTGCCAGTCAAAGTCTTGACAAAGATCTGCATACCACCACGGAGACGAAGCACAAGGTGAAGGGTCGACTC
CTTTTGGATGTTGTAGTCAGCAAGAGTCCTTCCGTCTTCAAGCTGCTTGCCAGCAAAGATAAGCCTCTGCTGATCCGGAGGGATTACTTCATTGTCCTGG
ATCTTAGCCTTGACGTTGTCAATAGTGTCAGAGCTCTCAACCTCCAAAGTAATAGTCTTGCCGGTAAGAGTCTTGACAAAGATCTGCATACCACCTCTTA
AACGGAGAACCAAGTGGAGAGTCGACTCCTTCTGGATGTTGTAATCAACGAAGGTACGACCATCTTCAAGCTGTTTACCGGCGAAGATCAATCTCTGCTG
GTCCGGAGGTATACCTTCCTTGTCCTGGATCTTTGCCTTAACATTGTCGATGGTGTCAGAGCTCTCAACCTCGAAAGTGATGGTCTTGCCAGTGAGTGTT
TTCACGAAAATTTGCATCTGAAAAATAAAAAGCAAACAGAGATCAGATCAGCAAACATACGAAATCATAGCAACACCAAAGAGAACAACAAAGAAACCCA
AAATTGAATAGATTGTCCTCGAAAACCCTAATTTTCTATGAGGATTTCAAAATCAAACAAGAAACTGGAACAGATCTACACGAGAAAACACACAATTGAA
TTGGATAGCCCTCAAAGACCCTAATTTTCTATGAGAATTTCAAGATCAAGCAATAAATTGAACAGATCTACATGATATAACACTCAATCGAAACGAGAAA
GCGTAACAGAGAATTCGGCAACAAGCAAATCCGACGAGCAACGAGTAGAGATTCAACAAAATCAAAAGAAGATTCAATAACCCAAAAAAACCCAAAATCG
AAAAGATCAGATGTGAAATCAAAACAAACGAATAAGAAGAAGAAGAAACATATATACCTTGAAAGAGTCGTTGGAAGAGAGAGTCGTAAAAGATTTGCTG
AGAACGACGATTTAGGGTTTGGGGAGAGAGAGATTGAAGAATCAGAGAAAGACGAAGGGGATGATAATTATGAGATCCTTCGAAGGAAGCTCTTCT