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Detailed information on CNT30312659


BLAST search results

BLAST vs Swiss-Prot:
sp|P69325|UBIQP_SOYBN, E-value = 0.0

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30528288Camelina sativaEucalyptus grandis46.8868.8885.48923forward
CNT30513419Camelina sativaJuglans regia33.7277.5785.84664forward
CNT3044330Camelina sativaPrunus dulcis46.3274.5784.87912forward
CNT30636126Camelina sativaCapsicum annuum46.5749.784.3917forward
CNT3095105Camelina sativaSolanum tuberosum46.3778.5784.56913forward
CNT3061726Camelina sativaArabidopsis lyrata22.569.7692.55443forward
CNT30229013Camelina sativaAnanas comosus46.3757.8984.78913forward
CNT30217431Camelina sativaKalanchoe fedtschenkoi46.4267.584.03914forward
CNT30359535Camelina sativaLactuca sativa45.1552.6384.81889forward
CNT30174646Camelina sativaVigna angularis43.8882.9284.26864forward
CNT30114619Camelina sativaEutrema salsugineum46.4284.5589.72914forward

Expression of CNT30312659

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MVSELSTSKVIVFPVRVFTKICIPPRSLRTR*

>peptide 2 (40 aa)
MVSELSTSSVIVFPVRVLTKICIPPRSLRTKWRVDSFWML*

>peptide 3 (48 aa)
AETTTENNIESIVKNFISLINQRSLQTLTDIYYALHLSSKSWNNLETL*

>peptide 4 (52 aa)
MRRCWSGGIPSLSWILAFTLSMVSELSTSSVMVFPVNVFTKICIPPRSLSTK*

>peptide 5 (61 aa)
MPSLSWILAFTLSMVSELSTSRVIVFPVRVLTKICICNSEKKLRSVQRSNPNKLIRTRSRN*

Sequence

>CNT30312659
AGCCGAAACGACTACAGAAAATAATATCGAAAGCATTGTCAAGAACTTCATCTCCCTCATCAATCAAAGAAGCTTACAGACTCTGACAGACATTTACTAC
GCTTTACACCTTTCTTCCAAGTCATGGAATAATTTAGAGACACTTTGAAGGGTAATTTCCTCTCAACCACACACAGTCAAAACAATTAAACATAAGCAAC
ATGACCAAAACCTCTAAAAACTATTCACCTTTCTCATCAACACTTTAAAGCCATCACCCCACACATATACTACAAGTCTTCGGAGGACTACAAGTCTACA
AGTATAGCAGAGCAGCAAGAGATAATTAATCTAGGCACAACCAGAGTGTGAACATCAAGCTTATAGCAACTTGTTCAGGCTTACCAATCAAACGAAGATA
AAGAGTACAGATATTCAATAGAGAAGAAGTCCAATTTGATATTTGAAAGATAAAAGGAAGAAAACATAGTTCAATCAATTATTTAACTGGGGACTTTATA
ATACCCACAAACACAAAGCACAAAGTTTTTTGAGAAACATTTTAGAAACCACCACGGAGACGGAGGACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGT
AGTCAGCCAATGTGCGACCATCCTCAAGCTGTTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATACCTTCCTTGTCCTGGATCTTAGCCTTCAC
ATTGTCGATGGTGTCGGAGCTCTCAACCTCGAGTGTGATGGTCTTCCCGGTCAATGTCTTCACGAAGATCTGCATACCACCACGAAGCCTTAGCACCAAG
TGAAGGGTAGACTCCTTCTGGATGTTGTAGTCAGCCAAGGTACGACCATCCTCCAACTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCCGGTGGGATAC
CCTCCTTGTCTTGGATCTTGGCTTTCACGTTGTCGATGGTGTCAGAGCTCTCCACCTCCAAAGTGATTGTCTTCCCGGTGAGAGTCTTCACGAAGATTTG
CATACCACCACGAAGCCTGAGAACAAGATGAAGGGTTGACTCCTTCTGGATGTTGTAGTCAGCTAGGGTTCTACCGTCCTCGAGTTGCTTTCCGGCGAAG
ATCAACCTCTGCTGGTCCGGTGGAATACCCTCCTTATCTTGGATCTTGGCTTTAACGTTGTCGATGGTGTCAGAACTCTCCACCTCGAGCGTAATCGTCT
TTCCGGTAAGGGTTTTGACGAAGATTTGCATACCACCACGGAGCCTGAGGACCAAGTGGAGGGTGGATTCTTTCTGGATGTTGTAGTCGGCCAACGTACG
CCCGTCCTCTAGTTGCTTTCCGGCGAAGATAAGCCTCTGCTGATCCGGAGGAATGCCTTCCTTGTCTTGGATCTTGGCCTTCACGTTGTCGATGGTGTCG
GAGCTTTCCACCTCTAGGGTGATAGTCTTTCCGGTGAGAGTCTTAACGAAGATCTGCATCTGTAATTCAGAAAAGAAACTGAGATCAGTACAAAGATCAA
ATCCAAACAAACTTATCAGAACCCGATCAAGAAACTAATACCAGATCTAATTAGAAATCACGGCTCTAAGCGTAAATAAGACGATATGATATGAATCGAA
TCGATAAAACTAGAATCGGTATCAAATTCAAACAAATCAACGCCGTAATAAAACAGATCTGAGAAAACTACAAACCCTAATCGAGAATTCAAAGAACAGA
TTCGCGAACGTACGAAACAGAAACGAAGAATCAGAATCTGAAGTTTACCTTGATTACGAATGAGAGATTTGAGAGAAGGGTTTTGATTTTTAGGTTTTGA
AGAAACTGGAATCTCAATTGTGAGGAGGAAAGGGCTCTAGGTTATTTGATTTATAGAAAAGGATGAAGACGACTTGGTCTCACGAGAAAGCTAAAGCGGT
GAAGCATTAACCAACTAGAATTTGACGCGTATGTATAATGGCGTGTTTACTTGCAAAGTTTTATTTTCC