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Detailed information on CNT30312526


BLAST search results

BLAST vs Swiss-Prot:
sp|P69325|UBIQP_SOYBN, E-value = 0.0

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30274489Camelina sativaChenopodium quinoa85.0674.9283.42917forward
CNT3066362Camelina sativaSelaginella moellendorffii84.5192.3983.1911forward

Expression of CNT30312526

Peptides detected in this lncRNA

>peptide 1 (42 aa)
MILIPIMIRKRDKRKDTIVHRIIFSWGLYKAPKHKLLKKLTK*

>peptide 2 (31 aa)
MVSELSTSSVMVFPVKVLTKICIPPRSLNTK*

>peptide 3 (31 aa)
MVSELSTSRVMVFPVRVLTKICIPPRRRKTK*

>peptide 4 (31 aa)
MVSELSTSKVIVFPVKVLTKICIPPRSLRTR*

Sequence

>CNT30312526
CGAGGATAAAGAGAACTGAATGATATTAATTCCAATCATGATACGAAAGAGAGATAAAAGAAAAGACACAATAGTTCATCGAATTATTTTTAGTTGGGGG
CTTTACAAGGCCCCAAAGCACAAGTTGTTAAAGAAACTTACAAAGTAACCATAACAGAGATTAGAAACCACCACGGAGACGGAGGACCAAGTGAAGGGTC
GATTCCTTCTGAATGTTGTAGTCAGCCAAAGTGCGACCATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATACCTTCCTTGT
CCTGAATCTTAGCCTTCACATTGTCAATGGTGTCGGAGCTCTCAACCTCCAGTGTGATGGTCTTCCCGGTCAAAGTCTTAACGAAAATCTGCATACCACC
ACGAAGCCTTAACACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCCAATGTGCGTCCATCCTCGAGCTGCTTTCCAGCGAAGATCAACCTC
TGCTGGTCCGGAGGGATCCCTTCCTTGTCCTGGATCTTAGCCTTCACGTTGTCAATGGTGTCGGAGCTCTCAACCTCGAGGGTGATGGTCTTCCCTGTGA
GAGTCTTGACGAAAATCTGCATACCTCCACGGAGACGCAAGACCAAGTGAAGTGTAGACTCCTTCTGAATGTTGTAGTCAGCTAAAGTCCTGCCGTCCTC
GAGTTGCTTACCGGCAAAGATCAACCTCTGCTGGTCTGGTGGGATACCCTCCTTGTCTTGGATTTTAGCTTTGACATTGTCTATGGTGTCAGAGCTCTCC
ACCTCCAAAGTGATAGTCTTTCCAGTCAAAGTCTTGACGAAGATTTGCATACCACCACGGAGCCTCAGAACAAGATGAAGGGTCGACTCCTTCTGGATGT
TGTAATCAGCCAAAGTCCTGCCGTCTTCTAGCTGCTTACCGGCAAAGATAAGCCTTTGCTGATCCGGAGGGATACCTTCCTTGTCCTGGATCTTGGCTTT
GACGTTGTCGATGGTGTCAGAGCTTTCCACCTCGAGGGTGATCGTCTTTCCGGTGAGAGTCTTAACGAAGATTTGCAT