Detailed information on CNT30312478


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30639595Camelina sativaNymphaea colorata20.4910.599450forward
CNT30144739Camelina sativaMedicago truncatula42.6222.4185.58104forward
CNT30611972Camelina sativaArabis alpina47.5448.7493.1116forward
CNT30354796Camelina sativaLactuca sativa76.6435.5583.42187forward
CNT30645006Camelina sativaCannabis sativa45.0813.3791.82110forward
CNT3021984Camelina sativaPopulus trichocarpa32.793.7486.2580forward

Expression of CNT30312478

Peptides detected in this lncRNA

>peptide 1 (29 aa)
RSWSLGTPTCQSETPTSLSFILWYFLGST*

>peptide 2 (33 aa)
GLGLWEHPPVSLRHQQVSPSSCGTSWDQLEDLP*

Sequence

>CNT30312478
CCGGTCTTGGTCTCTGGGAACACCCACCTGTCAGTCTGAGACACCAACAAGTCTCTCCTTCATCTTGTGGTACTTCTTGGGATCAACTTGAAGACCTTCC
TTGATGATAGACAAGACGATCTGGAACTCAGGGTTATCAGTAGAAGTAGGATCAGGGACCTGACCAGTCTTCTCAAAGATCTCCTCAGCCTTGACTCCCT
CATGGATCAAAAGCGTGGCGTCACCACCATCGTCAACAATCAGG