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Detailed information on CNT30312399


BLAST search results

BLAST vs Swiss-Prot:
sp|P69322|UBIQP_PEA, E-value = 0.0

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30629220Camelina sativaVigna unguiculata67.9282.1382.75887forward
CNT30169882Camelina sativaPistacia vera87.2955.2682.631140forward
CNT30635990Camelina sativaCapsicum annuum87.4455.0983.541142forward
CNT3094992Camelina sativaSolanum tuberosum70.679.2184.16922forward
CNT3086353Camelina sativaVigna radiata87.2153.1581.211139forward
CNT30542695Camelina sativaBrassica napus70.4459.4787.61920forward
CNT3073617Camelina sativaBrassica juncea87.8333.9687.011147forward
CNT30217449Camelina sativaKalanchoe fedtschenkoi87.2175.4882.441139forward
CNT30716337Camelina sativaMalus domestica golden82.0186.4483.571071forward
CNT30623964Camelina sativaDaucus carota87.2155.2984.021139forward
CNT30704854Camelina sativaPrunus avium87.7564.2784.121146forward
CNT30642981Camelina sativaCannabis sativa69.6881.1182.75910forward
CNT3032244Camelina sativaTheobroma cacao69.8379.3783.11912forward
CNT30334105Camelina sativaCynara cardunculus84.2346.65821100forward

Expression of CNT30312399

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MVSELSTSKVMVFPVSVLTKICIPPRSLRTK*

>peptide 2 (31 aa)
MVSELSTSKVIVFPVKVLTKICIPPRSLRTR*

>peptide 3 (42 aa)
MILIPIMIRKRDKRKDTIVHRIIFSWGLYKAPKHKLLKKLTK*

>peptide 4 (94 aa)
MKGRLLLDVVISQSPAILQLLSGKDQPLLVRWDTLFILDLGLNVVDGVRALHLQSNGLSSQRLDEDLHTTTKPEDQVKSRLLLDVVVSQGPAVF*

>peptide 5 (31 aa)
MVSELSTSRVMVFPVRVLTKICIPPRRRKTK*

>peptide 6 (31 aa)
MVSELSTSSVMVFPVKVLTKICIPPRSLNTK*

Sequence

>CNT30312399
CGAGGATAAAGAGAACTGAATGATATTAATTCCAATCATGATACGAAAGAGAGATAAAAGAAAAGACACAATAGTTCATCGAATTATTTTTAGTTGGGGG
CTTTACAAGGCCCCAAAGCACAAGTTGTTAAAGAAACTTACAAAGTAACCATAACAGAGATTAGAAACCACCACGGAGACGGAGGACCAAGTGAAGGGTC
GATTCCTTCTGAATGTTGTAGTCAGCCAAAGTGCGACCATCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGGATACCTTCCTTGT
CCTGAATCTTAGCCTTCACATTGTCAATGGTGTCGGAGCTCTCAACCTCCAGTGTGATGGTCTTCCCGGTCAAAGTCTTAACGAAAATCTGCATACCACC
ACGAAGCCTTAACACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGCCAATGTGCGTCCATCCTCGAGCTGCTTTCCAGCGAAGATCAACCTC
TGCTGGTCCGGAGGGATCCCTTCCTTGTCCTGGATCTTAGCCTTCACGTTGTCAATGGTGTCGGAGCTCTCAACCTCGAGGGTGATGGTCTTCCCTGTGA
GAGTCTTGACGAAAATCTGCATACCTCCACGGAGACGCAAGACCAAGTGAAGTGTAGACTCCTTCTGAATGTTGTAGTCAGCTAAAGTCCTGCCGTCCTC
GAGTTGCTTACCGGCAAAGATCAACCTCTGCTGGTCTGGTGGGATACCCTCCTTGTCTTGGATTTTAGCTTTGACATTGTCTATGGTGTCAGAGCTCTCC
ACCTCCAAAGTGATAGTCTTTCCAGTCAAAGTCTTGACGAAGATTTGCATACCACCACGGAGCCTCAGAACAAGATGAAGGGTCGACTCCTTCTGGATGT
TGTAATCAGCCAAAGTCCTGCCATCCTCCAGTTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCCGGTGGGATACCCTCTTTATCTTGGATCTTGGCCTT
AACGTTGTCGATGGTGTCAGAGCTCTCCACCTCCAAAGTAATGGTCTTTCCAGTCAGCGTCTTGACGAAGATCTGCATACCACCACGAAGCCTGAGGACC
AAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCAGCCAAGGTCCTGCCGTCTTCTAGCTGCTTACCGGCAAAGATAAGCCTTTGCTGATCCGGAGGGA
TACCTTCCTTGTCCTGGATCTTGGCTTTGACGTTGTCGATGGTGTCAGAGCTTTCCACCTCGAGGGTGATCGTCTTTCCGGTGAGAGTCTTAACGAAGAT
TTGCAT