Detailed information on CNT30312370


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30697086Camelina sativaOryza sativa39.827.9791.2580forward
CNT30524209Camelina sativaSetaria italica54.735.9385.45110forward
CNT30117918Camelina sativaOryza nivara39.88.991.2580forward

Expression of CNT30312370

Peptides detected in this lncRNA

>peptide 1 (40 aa)
RSIQEGEDPREQGGSQFHWSQSGIPCSSGNTAKLILSSKS*

>peptide 2 (65 aa)
PVNPRGRRSQRTRWFSVPLVTIWYPLLIREYSKVDFVLKVIDCTLGLTLLGWFWALPVEDHTSPWS

>peptide 3 (34 aa)
TGQSKRAKIPENKVVLSSIGHNLVSLAHQGIQQS*

Sequence

>CNT30312370
ACCGGTCAATCCAAGAGGGCGAAGATCCCAGAGAACAAGGTGGTTCTCAGTTCCATTGGTCACAATCTGGTATCCCTTGCTCATCAGGGAATACAGCAAA
GTTGATTTTGTCCTCAAAGTCATAGACTGCACCCTCGGGTTGACCCTTCTTGGCTGGTTTTGGGCCCTTCCTGTAGAAGATCATACCAGCCCTTGGTCCC
C