Detailed information on CNT30312278


BLAST search results

BLAST vs Swiss-Prot:
sp|Q8W4H7|EF1A2_ARATH, E-value = 6e-44

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30562820Camelina sativaActinidia chinensis90.7657.8986.55275forward
CNT30614218Camelina sativaArabis alpina100.3352.593.42304forward

Expression of CNT30312278

Peptides detected in this lncRNA

>peptide 1 (95 aa)
SFGSLLDCSLGDLGSSWVLLVHALDNTNSNVCLMSLTAKRPNGGYSEKVSTTMGLVGVILTIPASPFFKNLGSFSISLPERLSILVKISENFTAM*

>peptide 2 (35 aa)
HLAPFLTAALVTLAPVGSFLSTLLITPTATSASCP*

Sequence

>CNT30312278
ATCATTTGGCTCCCTTCTTGACTGCAGCCTTGGTGACCTTGGCTCCAGTTGGGTCCTTCTTGTCCACGCTCTTGATAACACCAACAGCAACGTCTGCCTC
ATGTCCCTAACAGCGAAACGTCCCAATGGTGGGTACTCAGAGAAAGTCTCAACAACCATGGGCTTGGTTGGAGTCATCTTAACCATACCAGCGTCACCAT
TCTTCAAAAACTTGGGCTCCTTCTCAATCTCCTTACCAGAACGCCTGTCAATCTTGGTCAAGATCTCAGAGAACTTCACTGCAATGTGAGACGTGTGGCA
ATC