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Detailed information on CNT30312265


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CG83|UBIQP_HORVU, E-value = 2e-103

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30203004Camelina sativaHelianthus annuus69.6140.6586.67465forward

Expression of CNT30312265

Peptides detected in this lncRNA

>peptide 1 (52 aa)
MRRCWSGGIPSLSWILAFTLSMVSELSTSSVMVFPVKVFTKICIPPRRRKTK*

Sequence

>CNT30312265
CCAGAAGCAACTTTTCAGTGCTTATCAAACAAACGAGGATAAAGAGAACTGAATGATATTAGTTCCAATCATAATACGAAAGAGAAATAAAAGAAAAGAC
ACAACATAGTTCATCGAATTATTTCATTGGGGGCTTTACAAGGCCCCATAGCACAAGTTGTAAAAGAAACTTACAAGTAACCACAACAGAGATTAAAAAC
CACCACGGAGACGGAGGACCAAGTGAAGGGTCGATTCCTTCTGAATGTTGTAGTCAGCCAAAGTGCGACCATCCTCGAGCTGCTTTCCAGCGAAGATGAG
ACGCTGCTGGTCCGGAGGGATACCTTCCTTGTCCTGGATCTTAGCCTTCACATTGTCAATGGTGTCGGAGCTCTCAACCTCCAGTGTGATGGTCTTCCCG
GTCAAAGTCTTCACGAAAATCTGCATACCACCACGGAGACGCAAGACCAAGTGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGCCAAAGTCCTGCCGT
CTTCTAGCTGCTTACCGGCAAAGATAAGCCTTTGCTGATCCGGAGGGATACCTTCCTTGTCCTGGATCTTGGCTTTGACGTTGTCGATTGTATCAGAGCT
TTCCACCTCGAGGGTGATTGTCTTTCCGGTGAGAGTCTTAACGAAGATTTGCATCTGCAATTCAGAAA