Detailed information on CNT30312227


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30523536Camelina sativaSetaria italica90.5267.6181.68382forward
CNT30700805Camelina sativaQuercus lobata65.8891.7584.17278forward
CNT30269232Camelina sativaChenopodium quinoa97.3964.6280.54411forward
CNT30403782Camelina sativaBeta vulgaris78.6779.4379.82332forward
CNT30489027Camelina sativaOlea europaea61.6175.1483.08260forward
CNT30506120Camelina sativaNicotiana attenuata61.1444.182.17258forward
CNT30205103Camelina sativaHelianthus annuus58.0634.682.04245forward
CNT30354836Camelina sativaLactuca sativa62.0945.4182.06262forward
CNT3051605Camelina sativaAmborella trichopoda45.9729.2682.47194forward
CNT30109704Camelina sativaOryza longistaminata53.0840.2982.14224forward
CNT30330867Camelina sativaDioscorea rotundata62.0936.2481.3262forward
CNT30335477Camelina sativaCynara cardunculus65.6472.8981.23277forward

Expression of CNT30312227

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MQVRSGYKQVMLGCKQAKSGCNLAMSGCS*

Sequence

>CNT30312227
GTAGGGACTAGATGGTGATAGTCTTGCATTGCTAGGAGAGTAAGCAAGAGATGGGCTGTATTTAGCTGACTGAGGGTTGTAGCTTGGAGACGTAGGACCA
TAGCTTGGTGATGTTGGACTGTAACTTGGTGAAGTTGGGCTGTAGCCAGGAGAAGTGGGGCTGTATGCAGGTGAAGTAGGACTATAAGATGGTGATGTGG
GACTATAGGATGGTGAGGTAGGGCTGTAAGAAGGAGAGGTTGGACTGTATGCAGGTGAGGTCGGGCTATAAGCAGGTGATGTTGGGCTGTAAGCAGGCGA
AGTCGGGCTGTAACTTGGCGATGTCGGGCTGTAGCTAGGAGACGTTGGACTGTAGCTTGGAGACGTTGGACTGTAGCTTGGAGACGTGGGGCTGTAGCTC
GGAGAGGTGGGAGAATAGGAAG