Detailed information on CNT30312051


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30374695Camelina sativaArabidopsis thaliana25.642.8797.681338forward
CNT30632461Camelina sativaVigna unguiculata27.6628.0793.021446reverse complement
CNT3082020Camelina sativaBrassica juncea60.2366.6996.413148forward

Expression of CNT30312051

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MAHLELSIPWDGSTKQPPRPTYLKFENRSRALRPRCL*

>peptide 2 (34 aa)
CTDGRSARARALGFSATAAPSYSSRPGSCPDGRV*

>peptide 3 (34 aa)
MGSPQADALSTQMPRHAVRRVLQTTIKAATSPRA*

>peptide 4 (50 aa)
MIYPHHDEISKITRACRPRCELVEYISVARVRPRTSKGITDLLLPQTSLA*

>peptide 5 (44 aa)
MLSQLFVFHKSKNFTSDYEIRMPPTVPVNHYSDPEGQHNRIEIL*

>peptide 6 (32 aa)
MVHGILQFTPSIAFRYVLHRCESRDIRCRESF*

>peptide 7 (32 aa)
MKYECPRLSLLIITPIPKANTIGSKSYDVIPC*

>peptide 8 (43 aa)
MIRFSGLLATSQAANHPRRRDPNTSPDHSIGRSDGRCVQRAGT*

>peptide 9 (40 aa)
MREPRYPLPRVVLDFRSQLSIRAHTVSGEANAKAVRLHVP*

>peptide 10 (52 aa)
MLSQLFVFHKSKNFTSDXCTDGRSARARALGFSATAAPSYSSRPGSCPDGRV*

>peptide 11 (58 aa)
LHRRPLRPGSRPRFFSDRRALLLIEAWLLPRRPGIGRALQRHPFSGLVDSAGELLHTP*

>peptide 12 (92 aa)
MLTLEPFSDDQGRSAVHPRGIPPISFLTPYGFTHPLTRTHVRLLGPCFKTGRMGSPQADARSTQMPRHAVKARAADHDHGSDVSAGVTRARA*

>peptide 13 (93 aa)
MSERSRRPWLGFWSTACGNTREASFRPLSAKDVGGRRFVTPRQTCPRPEGLGRNLRSKTRWFTGFCNSHQVSHFATFFIDARAEISVAESRFRL

>peptide 14 (82 aa)
MVRLVFRPYTQVRRTICTSVSLRASTRVSSGFAPLRHSSPSFGSRQACSHSNPSQMIKVGRRCTREGSRQSASLRLTGLLTR*

>peptide 15 (82 aa)
MVRLVFRPYTQVRRTICTSVSLRASTRVSSGFAPLRHSSPSFGSRQACSHSNPSQKIKVGRLCTREGSSQSASLRLTGLLTR*

>peptide 16 (94 aa)
MSERSRRPWLGFWSTACGNTREASFRPLSAKDVGGRRFVTPRQTCPRPEGLGRNLRSKTRWFTGFCNSHQVSHFATFFIDARAEISVAESRFRL*

>peptide 17 (37 aa)
MAHLELSIPWDGSTKQPPRPTYLKFENRSRALRPRCL*

>peptide 18 (30 aa)
MSDSLVRVSRRVEWGAHRPTPGARRCRGTP*

>peptide 19 (32 aa)
MVHGILQFTPSIAFRYVLHRCESRDIRCRESF*

Sequence

>CNT30312051
TCTGCACCGACGGCCGCTCCGCCCGGGCTCGCGCCCTAGGTTTTTCAGCGACCGCCGCGCCCTCCTACTCATCGAGGCCTGGCTCTTGCCCCGACGGCCG
GGTATAGGTCGCGCGCTTCAGCGCCATCCATTTTCGGGGCTAGTTGATTCGGCAGGTGAGTTGTTACACACTCCTTAGCGGATTTCGACTTCCATGACCA
CCGTCCTGCTGTCTTAATCGACCAACACCCTTTGTGGGTTCTAGGTTAGCGCGCAGTTGGGCACCGTAACCCGGCTTCCGGTTCATCCCGCATCGCCAGT
TCTGCTTACCAAAAATGGCCCACTTGGAGCTCTCGATTCCGTGGGACGGCTCAACAAAGCAGCCGCCCCGTCCTACCTATTTAAAGTTTGAGAATAGGTC
GAGGGCGTTGCGCCCCCGATGCCTCTAATCATTGGCTTTACCCGATAGAACTCGCGTCCGAGCTCCAGCTATCCTGAGGGAAACTTCGGAGGGAACCAGC
TACTAGATGGTTCGATTAGTCTTTCGCCCCTATACCCAAGTCAGACGAACGATTTGCACGTCAGTATCGCTGCGGGCCTCCACCAGAGTTTCCTCTGGCT
TCGCCCCGCTCAGGCATAGTTCACCATCTTTCGGGTCCCGACAGGCATGCTCACACTCGAACCCTTCTCAGAAGATCAAGGTCGGTCGGCTGTGCACCCG
TGAGGGATCCAGCCAATCAGCTTCCTTGCGCCTTACGGGTTTACTCACCCGTTGACTCGCACACATGTCAGACTCCTTGGTCCGTGTTTCAAGACGGGTC
GAATGGGGAGCCCACAGGCCGACGCCCTGAGCACGCAGATGCCGAGGCACGCCGTGAGGCGCGTGCTGCAGACCACGATTAAGGCAGCGACGTCTCCGCG
GGCGTAACGAAAGCCCGGGCTTAGGTCACCACCTTAATCCGCGTCGGTCCACGCCCCGAATCGATCGGCGGACCGGATTGCTCCGTTCCGCATCCGACCG
GGACGCATCGCCGGCCCCCATCCGCTTCCCTCCCGACAATTTCAAGCACTCTTTGACTCTCTTTTCAAAGTCCTTTTCATCTTTACCTCGCGGTACTTGT
TCGCTATCGGTCTCTCGCCCGTATTTAGCCTTGGACGGAATTTACCGCCCGATTGGGGCTGCATTCCCAAACAACCCGACTCGTAGACAGCGCCTCGTGG
TGCGACAGGGTCCGGGCACGACGGGGCTCTCACCCTCTCCGGCGCCCCTTTCCAGGGAACTTGAGCCCGGTCCGTCGCTGAGGACGCTTCTCCAGACTAC
AATTCGAACGCCGAAGACGTCCGATTTTCAAGCTGGGCTTTTCCCGGTTCGCTCGCCGTTACTAAGGGAATCCTTGTTAGTTTCTTTTCCTCCGCTTATT
GATATGCTTAAACTCAGCGGGTGATCCCGCCTGACCTGGGGTCGCTTTGAAGACTTTGGGTCATCTAGAGCTTCCGGACAAGAGCGACCGACGATAGGGA
AAGTGGATCAAGTTCACCACCGCATGTCGGAACGCTCCAGGCGTCCTTGGCTCGGATTTTGGTCAACCGCGTGCGGTAACACACGGGAGGCCAGCTTCCG
TCCCTTATCCGCGAAGGATGTGGGGGGACGACGATTTGTGACACCCAGGCAGACGTGCCCTCGGCCAGAAGGCTTGGGGCGCAACTTGCGTTCAAAGACT
CGATGGTTCACGGGATTCTGCAATTCACACCAAGTATCGCATTTCGCTACGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCGTTTTA
GACTTTAGATCGCAGCTCAGCATCCGCGCACACACCGTCTCCGGGGAAGCGAATGCCAAAGCCGTTCGGTTGCATGTTCCTTGACACTTTTCGTGCCGGG
GTTTTGTGATATCCGGAAGCAACGCGCACGACCAGACCGAGATAGAGCTCTCGACCGGGAAGATACGCGAAACCACGGAAACGGCAGGCAACGGGATCGG
CTAAGAAACCGGCCTACCGCGAGTGGTGATCGTTGGTTCGCGGGTCGTTCTGTTTGGACAGGTATCGACAATGATCCTTCCGCAGGTTCACCTACGGAAA
CCTTGTTACGACTTCTCCTTCCTCTAAATGATAAGGTTTAGTGGACTTCTCGCGACGTCGCAGGCGGCGAACCACCCACGTCGCCGCGATCCGAACACTT
CACCGGATCATTCAATCGGTAGGAGCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGTCAACGCGAGCTGATGACTCGCGCTTACTAGGAATTCCTCG
TTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTACCCGGGCCTGTCGGCCAAGGTGTGAACTCGTTGAATACATCAGT
GTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCTTGGCCTAAACGGCCATAGTCCCTCTAAGAAGCCGGC
CGTGAAGGGATGCCTCCACGTAGCTAGTTAGCAGGCTGAGGTCTCGTTCGTTAACGGAATTAACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGC
ACCACCACCCATAGAATCAAGAAAGAGCTCTCAGTCTGTCAATCCTTACTATGTCTGGACCTGGTAAGTTTCCCCGTGTTGAGTCAAATTAAGCCGCAGG
CTCCACTCCTGGTGGTGCCCTTCCGTCAATTCCTTTAAGTTTCAGCCTTGCGACCATACTCCCCCCGGAACCCAAAAACTTTGATTTCTCATAAGGTGCC
AGCGGAGTCCTAAAAGCAACATCCGCTGATCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGAGCCCCCAACTTTCGTT
CTTGATTAATGAAAACATCCTTGGCAAATGCTTTCGCAGTTGTTCGTCTTTCATAAATCCAAGAATTTCACCTCTGACTATGAAATACGAATGCCCCCGA
CTGTCCCTGTTAATCATTACTCCGATCCCGAAGGCCAACACAATAGGATCGAAATCCTATGATGTTATCCCATGCTAATGTATACAGAGCGTAGGCTTGC
TTTGAGCACTCTAATTTCTTCAAAGTAACAGCGCCGGAGGCTCCACTCCTGGTGGTGCCCTTCCGTCAATTCCTTTAAGTTTCAGCCTTGCGACCATACT
CCCCCCGGAACCCAAAAACTTTGATTTCTCATAAGGTGCCAGCGGAGTCCTAAAAGCAACATCCGCTGATCCCTGGTCGGCATCGTTTATGGTTGAGACT
AGGACGGTATCTGATCGTCTTCGAGCCCCCAACTTTCGTTCTTGATTAATGAAAACATCCTTGGCAAATGCTTTCGCAGTTGTTCGTCTTTCATAAATCC
AAGAATTTCACCTCTGACNTCTGCACCGACGGCCGCTCCGCCCGGGCTCGCGCCCTAGGTTTTTCAGCGACCGCCGCGCCCTCCTACTCATCGAGGCCTG
GCTCTTGCCCCGACGGCCGGGTATAGGTCGCGCGCTTCAGCGCCATCCATTTTCGGGGCTAGTTGATTCGGCAGGTGAGTTGTTACACACTCCTTAGCGG
ATTTCGACTTCCATGACCACCGTCCTGCTGTCTTAATCGACCAACACCCTTTGTGGGTTCTAGGTTAGCGCGCAGTTGGGCACCGTAACCCGGCTTCCGG
TTCATCCCGCATCGCCAGTTCTGCTTACCAAAAATGGCCCACTTGGAGCTCTCGATTCCGTGGGACGGCTCAACAAAGCAGCCGCCCCGTCCTACCTATT
TAAAGTTTGAGAATAGGTCGAGGGCGTTGCGCCCCCGATGCCTCTAATCATTGGCTTTACCCGATAGAACTCGCGTCCGAGCTCCAGCTATCCTGAGGGA
AACTTCGGAGGGAACCAGCTACTAGATGGTTCGATTAGTCTTTCGCCCCTATACCCAAGTCAGACGAACGATTTGCACGTCAGTATCGCTGCGGGCCTCC
ACCAGAGTTTCCTCTGGCTTCGCCCCGCTCAGGCATAGTTCACCATCTTTCGGGTCCCGACAGGCATGCTCACACTCGAACCCTTCTCAGATGATCAAGG
TCGGTCGGCGGTGCACCCGCGAGGGATCCCGCCAATCAGCTTCCTTACGCCTTACGGGTTTACTCACCCGTTGACTCGCACACATGTCAGACTCCTTGGT
CCGTGTTTCAAGACGGGTCGAATGGGGAGCCCACAGGCCGACGCCCGGAGCACGCAGATGCCGAGGCACGCCGTAAAGGCGCGTGCTGCAGACCACGATC
ACGGCAGCGACGTCTCCGCGGGCGTAACAAGAGCCCGGGCTTAGGCCACCGCCGTAATCCGCGTCGGTCCACGCCCCGAATCGATCGGCGGACCGGATTG
CTCCGTTCCGCATCCGACCGGGACGCATCGCCGGCCCCCATCCGCTTCCCTCCCGACAATTTCAAGCACTCTTTGACTCTCTTTTCAAAGTCCTTTTCAT
CTTTACCTCGCGGTACTTGTTCGCTATCGGTCTCTCGCCCGTATTTAGCCTTGGACGGAATTTACCGCCCGATTGGGGCTGCATTCCCAAACAACCCGAC
TCGTAGACAGCGCCTCGTGGTGCGACAGGGTCCGGGCACGACGGGGCTCTCACCCTCTCCGGCGCCCCTTTCCAGGGAACTTGAGCCCGGTCCGTCGCTG
AGGACGCTTCTCCAGACTACAATTCGAACGCCGAAGACGTCCGATTTTCAAGCTGGGCTTTTCCCGGTTCGCTCGCCGTTACTAAGGGAATCCTTGTTAG
TTTCTTTTCCTCCGCTTATTGATATGCTTAAACTCAGCGGGTGATCCCGCCTGACCTGGGGTCGCTTTGAAGACTTTGGGTCATCTAGAGCTTCCGGACA
AGAGCGACCGACGATAGGGAAAGTGGATCAAGTTCACCACCGCATGTCGGAACGCTCCAGGCGTCCTTGGCTCGGATTTTGGTCAACCGCGTGCGGTAAC
ACACGGGAGGCCAGCTTCCGTCCCTTATCCGCGAAGGATGTGGGGGGACGACGATTTGTGACACCCAGGCAGACGTGCCCTCGGCCAGAAGGCTTGGGGC
GCAACTTGCGTTCAAAGACTCGATGGTTCACGGGATTCTGCAATTCACACCAAGTATCGCATTTCGCTACGTTCTTCATCGATGCGAGAGCCGAGATATC
CGTTGCCGAGAGTCGTTTTAGACTTTA