Detailed information on CNT30311981


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30274113Camelina sativaChenopodium quinoa98.4762.0289.41387forward
CNT3020493Camelina sativaCitrullus lanatus98.4725.0686.05387forward
CNT30600411Camelina sativaFraxinus excelsior95.1793.2784.76374forward
CNT30355420Camelina sativaLactuca sativa87.0249.7190.06342forward
CNT30151899Camelina sativaPrunus persica99.2435.3686.41390forward
CNT3053027Camelina sativaAmborella trichopoda84.7376.9183.48333forward

Expression of CNT30311981

Peptides detected in this lncRNA

>peptide 1 (53 aa)
MHLNGLNLSGQPCGSKGHNHSRLDQTSLNTSHWHRSNTTNLVDILKWKTEGLV*

>peptide 2 (37 aa)
MLSPSNPEMGTNGILSGLYPTFFRYEDTSLMISSYLAL

Sequence

>CNT30311981
TTGACATTGAATCCAACATTGTCACCGGGAAGGGCCTCTAGAAGAGACTCGTGATGCATCTCAACGGACTTAACCTCAGTGGTCAACCCTGTGGGAGCAA
AGGTCACAACCATTCCAGGCTTGATCAAACCAGTCTCAACACGTCCCACTGGCACCGTTCCAATACCACCAATCTTGTAGACATCCTGAAGTGGAAGACG
GAGGGGCTTGTCTGATGGCCTCTTGGGCTCGTTGATCTGGTCAAGAGCCTCAAGAAGAGTTGGTGGACCTCTCAATCATGTTGTCTCCCTCGAATCCAGA
GATGGGCACGAATGGGATTTTGTCAGGGTTGTATCCGACCTTCTTCAGGTATGAAGACACCTCCTTGATGATTTCATCGTACCTAGCCTTGGA