Detailed information on CNT30311890


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3098913Camelina sativaSolanum tuberosum41.4673.1197.541017forward

Expression of CNT30311890

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MAHLELSIPWDGSTKQPPRPTYLKFENRSRALRPRCL*

>peptide 2 (30 aa)
MSDSLVRVSRRVEWGAHRPTPGARRCRGTP*

>peptide 3 (92 aa)
MLTLEPFSDDQGRSAVHPRGIPPISFLTPYGFTHPLTRTHVRLLGPCFKTGRMGSPQADARSTQMPRHAVKARAADHDHGSDVSAGVTRARA*

>peptide 4 (52 aa)
MLSQLFVFHKSKNFTSDXCTDGRSARARALGFSATAAPSYSSRPGSCPDGRV*

>peptide 5 (82 aa)
MVRLVFRPYTQVRRTICTSVSLRASTRVSSGFAPLRHSSPSFGSRQACSHSNPSQMIKVGRRCTREGSRQSASLRLTGLLTR*

>peptide 6 (43 aa)
MIRFSGLLATSQAANHPRRRDPNTSPDHSIGRSDGRCVQRAGT*

>peptide 7 (50 aa)
MIYPHHDEISKITRACRPRCELVEYISVARVRPRTSKGITDLLLPQTSLA*

Sequence

>CNT30311890
CTACGGAAACCTTGTTACGACTTCTCCTTCCTCTAAATGATAAGGTTTAGTGGACTTCTCGCGACGTCGCAGGCGGCGAACCACCCACGTCGCCGCGATC
CGAACACTTCACCGGATCATTCAATCGGTAGGAGCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGTCAACGCGAGCTGATGACTCGCGCTTACTAGG
AATTCCTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTACCCGGGCCTGTCGGCCAAGGTGTGAACTCGTTGAA
TACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCTTGGCCTAAACGGCCATAGTCCCTCTAA
GAAGCCGGCCGTGAAGGGATGCCTCCACGTAGCTAGTTAGCAGGCTGAGGTCTCGTTCGTTAACGGAATTAACCAGACAAATCGCTCCACCAACTAAGAA
CGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTCTCAGTCTGTCAATCCTTACTATGTCTGGACCTGGCTGAGGTCTCGTTCGTTAACGGAATTA
ACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTCTCAGTCTGTCAATCCTTACTATGTCTGGACCT
GGTAAGTTTCCCCGTGTTGAGTCAAATTAAGCCGCAGGCTCCACTCCTGGTGGTGCCCTTCCGTCAATTCCTTTAAGTTTCAGCCTTGCGACCATACTCC
CCCCGGAACCCAAAAACTTTGATTTCTCATAAGGTGCCAGCGGAGTCCTAAAAGCAACATCCGCTGATCCCTGGTCGGCATCGTTTATGGTTGAGACTAG
GACGGTATCTGATCGTCTTCGAGCCCCCAACTTTCGTTCTTGATTAATGAAAACATCCTTGGCAAATGCTTTCGCAGTTGTTCGTCTTTCATAAATCCAA
GAATTTCACCTCTGACNTCTGCACCGACGGCCGCTCCGCCCGGGCTCGCGCCCTAGGTTTTTCAGCGACCGCCGCGCCCTCCTACTCATCGAGGCCTGGC
TCTTGCCCCGACGGCCGGGTATAGGTCGCGCGCTTCAGCGCCATCCATTTTCGGGGCTAGTTGATTCGGCAGGTGAGTTGTTACACACTCCTTAGCGGAT
TTCGACTTCCATGACCACCGTCCTGCTGTCTTAATCGACCAACACCCTTTGTGGGTTCTAGGTTAGCGCGCAGTTGGGCACCGTAACCCGGCTTCCGGTT
CATCCCGCATCGCCAGTTCTGCTTACCAAAAATGGCCCACTTGGAGCTCTCGATTCCGTGGGACGGCTCAACAAAGCAGCCGCCCCGTCCTACCTATTTA
AAGTTTGAGAATAGGTCGAGGGCGTTGCGCCCCCGATGCCTCTAATCATTGGCTTTACCCGATAGAACTCGCGTCCGAGCTCCAGCTATCCTGAGGGAAA
CTTCGGAGGGAACCAGCTACTAGATGGTTCGATTAGTCTTTCGCCCCTATACCCAAGTCAGACGAACGATTTGCACGTCAGTATCGCTGCGGGCCTCCAC
CAGAGTTTCCTCTGGCTTCGCCCCGCTCAGGCATAGTTCACCATCTTTCGGGTCCCGACAGGCATGCTCACACTCGAACCCTTCTCAGATGATCAAGGTC
GGTCGGCGGTGCACCCGCGAGGGATCCCGCCAATCAGCTTCCTTACGCCTTACGGGTTTACTCACCCGTTGACTCGCACACATGTCAGACTCCTTGGTCC
GTGTTTCAAGACGGGTCGAATGGGGAGCCCACAGGCCGACGCCCGGAGCACGCAGATGCCGAGGCACGCCGTAAAGGCGCGTGCTGCAGACCACGATCAC
GGCAGCGACGTCTCCGCGGGCGTAACAAGAGCCCGGGCTTAGGCCACCGCCGTAATCCGCGTCGGTCCACGCCCCGAATCGATCGGCGGACCGGATTGCT
CCGTTCCGCATCCGACCGGGACGCATCGCCGGCCCCCATCCGCTTCCCTCCCGACAATTTCAAGCACTCTTTGACTCTCTTTTCAAAGTCCTTTTCATCT
TTACCTCGCGGTACTTGTTCGCTATCGGTCTCTCGCCCGTATTTAGCCTTGGACGGAATTTACCGCCCGATTGGGGCTGCATTCCCAAACAACCCGACTC
GTAGACAGCGCCTCGTGGTGCGACAGGGTCCGGGCACGACGGGGCTCTCACCCTCTCCGGCGCCCCTTTCCAGGGAACTTGAGCCCGGTCCGTCGCTGAG
GACGCTTCTCCAGACTACAATTCGAACGCCGAAGACGTCCGATTTTCAAGCTGGGCTTTTCCCGGTTCGCTCGCCGTTACTAAGGGAATCCTTGTTAGTT
TCTTTTCCTCCGCTTATTGATATGCTTAAACTCAGCGGGTGATCCCGCCTGAC