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Detailed information on CNT30311740


BLAST search results

BLAST vs Swiss-Prot:
sp|P13951|RBS_SINAL, E-value = 1e-47

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30355778Camelina sativaLactuca sativa31.7422.0185.55173forward

Expression of CNT30311740

Peptides detected in this lncRNA

>peptide 1 (46 aa)
MEASTLSSTVHRSIRTMEASTLSSTVHRSIRVCFRAHGTQIRATYT*

>peptide 2 (97 aa)
GLVGDETDALYLTGVVESDNPNEGVRVLLLALFHFLQHLSGVSTSEQWKLPHCPVPSIVVSEQWKLPHCPVPSIVVSGCASVLTVHKSVLHTHEKTI*

Sequence

>CNT30311740
GGGGGCTTGTAGGCGATGAAACTGATGCATTGTACTTGACGGGTGTTGTCGAATCCGATAATCCTAATGAAGGCGTTAGGGTACTCCTTCTTGCACTCTT
CCACTTCCTTCAACACTTGAGCGGAGTCAGTACATCCGAACAATGGAAGCTTCCACATTGTCCAGTACCGTCCATCGTAGTATCCGAACAATGGAAGCTT
CCACATTGTCCAGTACCGTCCATCGTAGTATCCGGGTGTGCTTCCGTGCTCACGGTACACAAATCCGTGCTACATACACATGAGAAAACCATTTAATACA
ATTCACATGGTGAATCAATTTTGGTTTAGAAAATCCGGTTATTGACTTTGGTGTCTTGCAATGTAAGTAAAATTAGAGAAAAAGGAAGAGTTATGTGTTA
ATTTACCTCCAACTCGAATTCAACACAAGGAATCCACTTGTTGCGGAGAAGGTAGTCAACTTCCTTACCCAATTCGACATCGGTAAGGTCAGGAAGGTAA
GATAAAGTCTCAAACTTCTTCTTTCCAATTGGTGGCCACACCTAT