Detailed information on CNT30311670


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30640872Camelina sativaNymphaea colorata55.940.6983.12308forward
CNT30376379Camelina sativaArabidopsis thaliana93.4769.2288.16515forward
CNT30403468Camelina sativaBeta vulgaris83.1259.1779.26458forward
CNT30710467Camelina sativaGlycine max64.0748.8281.59353forward
CNT3091701Camelina sativaSolanum tuberosum72.9652.8979.6402forward
CNT30398985Camelina sativaTriticum turgidum30.8526.3282.94170forward
CNT30591824Camelina sativaMusa acuminata50.4570.3881.29278forward
CNT30508722Camelina sativaSolanum lycopersicum69.1574.2780.05381forward
CNT30263459Camelina sativaBrassica rapa90.7492.4285500forward
CNT30625542Camelina sativaDaucus carota59.1734.4679.14326forward
CNT3027877Camelina sativaTheobroma cacao61.3485.5782.84338forward

Expression of CNT30311670

Peptides detected in this lncRNA

>peptide 1 (57 aa)
MLDCKMAKLDCKKERSDCMQAKSGCNLGMLGCSLETLDYSLETWGCSSERWENRKDL*

Sequence

>CNT30311670
CTGTAGCTTGGAGATGTAGGACTGTAGGGACTAGATGGTGATAGTCTTGCATTGCTAGGAGAGTAAGCAAGAGATGGGCTATATTTAGCAGACTGAGGGT
TGTAGCTTGGAGACGTAGGACCATAGCTTGGTGATGTTGGACTGTAACTTGGTGAAGTTGGGCTGTAGCCAGGTGAAGTGGGGCTGTATGCAGGTGAAGT
AGGACTATAAGATGGTGATGTGGGACTATAGGATGGTGAGGTAGGGCTGTAAGAAGGCGATGTTGGACTGTAAGATGGCGAAGTTGGACTGTAAGAAGGA
GAGGTCGGACTGTATGCAGGCGAAGTCGGGCTGTAACTTGGGGATGTTGGGCTGTAGCTTGGAGACGTTGGACTATAGCTTGGAGACGTGGGGCTGTAGC
TCGGAGAGGTGGGAGAATAGGAAGGACTTGTAGGAGAATAAGCAGGGCTTGTTGGACTATAGGCAGGAGAACTGGGACTGTAGGTAGGCGAAGTGGGACT
GTAGGTAGGCGAAGTGGGGCTGTAGGTAGGCGAAGTCGGGCTATATACAGG