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Detailed information on CNT30311656


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30549166Camelina sativaIpomoea triloba54.9545.3981.64305forward
CNT30516792Camelina sativaJuglans regia80.3650.1181.84446forward
CNT30377104Camelina sativaArabidopsis thaliana96.5875.9290.86536forward
CNT3021339Camelina sativaCitrullus lanatus63.7855.8481.36354forward
CNT30727661Camelina sativaCorchorus capsularis87.3977.4882.27485forward
CNT30378927Camelina sativaManihot esculenta77.1269.1480.14428forward
CNT30524942Camelina sativaPhaseolus vulgaris59.8249.4881.33332forward
CNT30195835Camelina sativaPisum sativum38.9285.0483.33216forward
CNT30490956Camelina sativaOlea europaea44.3258.5781.71246forward
CNT3042435Camelina sativaPrunus dulcis85.2368.3582.45473forward
CNT30304911Camelina sativaTriticum aestivum36.0433.4483200forward
CNT30400271Camelina sativaTriticum turgidum37.1241.6282.52206forward
CNT30559890Camelina sativaActinidia chinensis72.615981.89403forward
CNT30235097Camelina sativaBrassica oleracea96.466.7985.79535forward
CNT30508904Camelina sativaSolanum lycopersicum75.1467.4879.62417forward
CNT30145737Camelina sativaMedicago truncatula78.9271.180.59438forward
CNT3062262Camelina sativaArabidopsis lyrata93.6994.8990.77520forward
CNT3079663Camelina sativaBrassica juncea95.1499.2587.88528forward
CNT30205370Camelina sativaHelianthus annuus60.5451.4580.95336forward
CNT30688581Camelina sativaTriticum urartu36.5834.9482.27203forward
CNT30476941Camelina sativaArabidopsis halleri96.0466.5490.81533forward
CNT30154777Camelina sativaPrunus persica96.9467.2582.34538forward
CNT30121168Camelina sativaCitrus clementina78.0240.7780.83433forward
CNT3035176Camelina sativaCucumis melo59.8260.3681.63332forward

Expression of CNT30311656

Peptides detected in this lncRNA

>peptide 1 (71 aa)
MLDCKMAKLDCKKERSDCMQVKSGYKQVMLGCKQAKSGCNLGMLGCSLETLDYSLETWGCSSERWENRKDL*

Sequence

>CNT30311656
GTAGCTTGGAGATGTAGGACTGTAGGGACTAGATGGTGATAGTCTTGCATTGCTAGGAGAGTAAGCAAGAGATGGGCTATATTTAGCAGACTGAGGGTTG
TAGCTTGGAGACGTAGGACCATAGCTTGGTGATGTTGGACTGTAACTTGGTGAAGTTGGGCTGTAGCCAGGTGAAGTGGGGCTGTAGCCAGGTGAAGTAG
GACTATAAGATGGTGATGTGGGACTATAGGATGGTGAGGTAGGGCTGTAAGAAGGCGATGTTGGACTGTAAGATGGCGAAGTTGGACTGTAAGAAGGAGA
GGTCGGACTGTATGCAGGTGAAGTCGGGCTATAAGCAGGTGATGTTGGGCTGTAAGCAGGCGAAGTCGGGCTGTAACTTGGGGATGTTGGGCTGTAGCTT
GGAGACGTTGGACTATAGCTTGGAGACGTGGGGCTGTAGCTCGGAGAGGTGGGAGAATAGGAAGGACTTGTAGGAGAATAAGCAGGGCTTGTTGGACTAT
AGGCAGGAGAACTGGGACTGTAGGTAGGCGAAGTGGGACTGTAGGTAGGCGAAGT