Detailed information on CNT30311531


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30641622Camelina sativaNymphaea colorata45.1656.6590.471648reverse complement
CNT30355977Camelina sativaLactuca sativa41.987.3290.911529forward

Expression of CNT30311531

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MGYNPCFWSQGLLRTLSGGEFGWGGTSVKR*

>peptide 2 (69 aa)
MRPPPDCRPSVGASAPKGTCRWLSPFGGSAVRTALNHYFHRAAGRILCRRLKYATGYCKWQSGLAATIH*

>peptide 3 (53 aa)
MREIQKRIRLKFRNREVAVDGNVRESGDVGRGLGKSYLFCLTACPPWKWLSRR*

>peptide 4 (49 aa)
MAQPEVGSSGWKSTARRVVSSALPAALENPEDRVPLTPGRTHNRIRSPR*

>peptide 5 (55 aa)
MPRHLISDAHEWINEIPTVPVYYPAKPQPRERAWQNQRGKKTLLSLTLVRLCEMT*

>peptide 6 (55 aa)
MPRHLISDAHEWINEIPTVPVYYPAKPQPRERAWQNQRGKKTLLSLTLVRLCEMT*

>peptide 7 (40 aa)
MNRKLGYGAQLRANLEPIKGVGRLRQQDGGHGSRNPVRSV*

>peptide 8 (36 aa)
MERCRQGKSAKWIHNFGKRIGSEGWVRGSQFRTRRL*

>peptide 9 (48 aa)
WAPHSTRLETRTKESFMCASQRVNKPVRRKEADWRDPSRVHRRPILIF*

>peptide 10 (43 aa)
MTLLRAVRCVLAGGRTGNGSFGSFPRASNSQLRTGTDKGNPTV*

>peptide 11 (34 aa)
MNGLTRFPLSLSTIQRNHSQGNGLGRISGERRPC*

>peptide 12 (34 aa)
MNGLTRFPLSLSTIQRNHSQGNGLGRISGERRPC*

Sequence

>CNT30311531
GTGGGCTCCCCATTCGACCCGTCTTGAAACACGGACAAAGGAGTCTTTCATGTGTGCGAGTCAACGGGTGAATAAACCCGTAAGGCGTAAGGAAGCTGAT
TGGCGGGATCCCTCGCGGGTGCACCGCCGACCGATCTTGATCTTCTAAGAAGGGTTCGAGTGTGAGCATGCCTGTCGGGACCCGAAAGATGGTGAACTTT
GCCTGAGCGAGGCGAAGCCAGAGGAAACTCTGGTGGAGGCCCGCAGCGATACTGACGTGTAAATCGTTCGTCTGACTTGGGTATAGGGGCGAAAGACTAA
TCGAACCATCTAGTAGTTGGTTCCCTCCGAAGTTTCCCTCAGGATAGCTGAAGCTCGGACGCGAGTTCTATCGGGTGAAGCCAATGATTAGAGGCATCGG
GGGCGCAACGCCCTCGACCTATTCTCAAACTTTAAATAGGTAGGACGGGGCGGCTGCTTTGTTGAGCCGTCCCACGGAATTGTGAGCTCCAAGTGGGCCA
TTTTTGGTAAGCAGAACTGGCGATGTGGGATGAACCGGAAGCTGGGTTATGGTGCCCAACTGCGCGCTAACCTAGAACCCATAAAGGGTGTTGGTCGATT
AAGACAGCAGGACGGTGGTCATGGAAGTCGAAATCCGGTAAGGAGTGTTTAACAACTCACCTGTCGAATTAACTATCCCCGAAAATGGATGGCGCTAAAG
AGCGCGACCTATACCAGGCCGTCGGGGCAAGAGCCAGGCCTCGATGAGTAGGAGGGCGCGGCGGTCGCTGTAAAACCTAGGGCGCGAGCCCGGGCGGAGC
GGCCGTCGGTGCAGATCTTGGTGGTAGTAGCAAATATTCAAATGAGAACTTTGAAGGCCGAAGAGGGGAAAGGTTCCATGTGAACGGCACTTGCACATGG
GTTAGTCGATCCTAAGAGTCGGAGGAAACCCGTCTGATAGCGCTTATGCGCGAAATTCAAAAGAGGATCCGGTTAAAATTCCGGAACCGGGAAGTGGCTG
TTGACGGCAACGTTAGGGAGTCCGGAGACGTCGGCAGGGGCCTTGGGAAGAGTTATCTTTTCTGTTTAACAGCCTGCCCACCCTGGAAATGGCTCAGCCG
GAGGTAGGATCCAGCGGCTGGAAGAGCACCGCACGTCGCGTGGTGTCTAGTGCGCTCCCGGCGGCCCTTGAAAATCCGGAGGACCGAGTGCCACTCACGC
CCGGTCGTACTCATAACCGCATCAGGTCTCCAAGGTGAACAGCCTCTGGTCGATGGAACGATGTAGACAAGGGAAGTCGGCAAAATGGATCCATAACTTC
GGGAAAAGGATTGGCTCTGAGGGCTGGGTCCGGGGATCCCAGTTCCGAACCCGTCGGCTGTAGGCGAACTGCTCGAGCTGCTTCCACGGCAAGAGCGGGT
CGCTGCGTGCTGGCCGGGGGACGGATTGGGAACGGTTTCTTCGGGAACTTTCCCCGGGCATCGAACAGTCAGCTCAAAACTGGTACAGACAAGGGGAATC
TGACTGTTTAATTAAAAAAGCATTGCGATGGTCCTTGCGGATGCTAACGCAATGTGATTTCTGCCCAGTGCTCTGAATGTCAAAGTGAAGAAATTCAACC
AAGCGCGGGTAAACGGTGGGAGTAACTATGACTCTCTTAAGAGCGGTTCGCTGCGTGCTGGCCGGGGGACGGACTGGGAACGGCTCCTTCGGGAGCTTTC
CCCGGGCATCGAACAGTCAGCTCAGAACTGGTACGGACAAGGGGAATCCGACTGTTTAATTAAAACAAAGCATTGCGATGGTCCTTGCGGATGCTAACGC
AATGTGATTTCTGCCCAGTGCTCTGAATGTCAAAGTGAAGAAATTCAACCAAGCGCGGGTAAACGGCGGGAGTAACTATGACTCTCTTAAGGTAGCCAAA
TGCCTCGTCATCTAATTAGTGACGCGCATGAATGGATTAACGAGATTCCCACTGTCCCTGTCTACTATCCAGCGAAACCACAGCCAAGGGAACGGGCTTG
GCAGAATCAGCGGGGAAAGAAGACCCTGTTGAGCTTGACTCTAGTCCGACTTTGTGAAATGACTTGAGAGGTGTAGGATAAGTGGGAGCTCCGGCGCAAG
TGAAATACCACTACTTTTAACGTTATTTTACTTACTCCGTGAATCGGAGATGGGGTACAACCCCTGTTTTTGGTCCCAAGGCTTGCTTCGGACATTGTCA
GGTGGGGAGTTTGGCTGGGGCGGCACATCTGTTAAAAGATAACGCAGGTGTCCTAAGATGAGCTCAACGAGAACAGAAATCTCGTGTGGAACAAAAGGGT
AAAAGCTCGTTTGATTCTGATTTTCAGTACGAATACGAACCGTGAAAGCGTGGCCTATCGATCCTTTAGACCTTCGGAATTTGAAGCTAGAGGTGTCAGA
AAAGGAACATCAGCTGGGTTTAGACCGTCGTGAGACAGGTTAGTTTTACCCTACTGATGCACACGTCGCGATAGTAATTCAACCTAGTACGAGAGGAACC
GTTGATTCGCACAATTGCGCGGGTAAACGGCGGGAGTAACTATGACTCTCTTAAGGTAGCCAAATGCCTCGTCATCTAATTAGTGACGCGCATGAATGGA
TTAACGAGATTCCCACTGTCCCTGTCTACTATCCAGCGAAACCACAGCCAAGGGAACGGGCTTGGCAGAATCAGCGGGGAAAGAAGACCCTGTTGAGCTT
GACTCTAGTCCGACTTTGTGAAATGACTTGAGAGGTGTAGGATAAGTGGGAGCTCCGGCGCAAGTGAAATACCACTACTTTTAACGTTATTTTACTTACT
CCGTGAATCGGAGGCGGGGTACAACCCCTGTTTTTGGTCCCAAGACTCGCTTCGGCGGGTCGATCCGGGCGGAGGACATTGTCAGGTGGGGAGTTTGGCT
GGGGCGGCACATCTGTTAAAAGATAACGCAGGTGTCCTAAGATGAGCTCAACGAGAACAGAAATCTCGTGTGGAACAAAAGGGTAAAAGCTCGTTTGATT
CTGATTTTCAGTACGAATACGAACCGTGAAAGCGTGGCCTATCGATCCTTTAGACCTTCGGAATTTGAAGCTAGAGGTGTCAGAAAAGTTACCACAGGGA
TAACTGGCTTGTGGCAGCCAAGCGTTCATAGCGACGTTGCTTTTTGATCCTTCGATGTCGGCTCTTCCTATCATTGTGAAGCAGAATTCACCAAGTGTTG
GATTGTTCACCCACCAATAGGGAACGTGAGCTGGGTTTAGACCGTCGTGAGACAGGTTAGTTTTACCCTACTGATGCCCGCGTCGCGATAGTAATTCAAC
CTAGTACGAGAGGAACCGTTGATTCGCACAATTGGTCATCGCGCTTGGTTGAAAAGCCAGTGGCGCGAAGCTACCGTGCGCTGGATTATGACTGAACGCC
TCTAAGTCAGAATCCGGGCTAGAAGCGACGCATGCGCCCGCCGCCCGATTGCCGACCCTCAGTAGGAGCTTCGGCTCCCAAAGGCACGTGTCGTTGGCTA
AGTCCGTTCGGCGGAAGCGCCGTTCGGACCGCCTTGAATCATTATTTCCACCGAGCGGCGGGTAGAATCCTTTGCAGACGACTTAAATACGCGACGGGGT
ATTGTAAGTGGCAGAGTGGCCTTGCTGCCACGATCCACTGAGATTCAGC