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Detailed information on CNT30311486


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30595404Camelina sativaEragrostis curvula92.0398.7693.85959forward

Expression of CNT30311486

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MNGLTRFPLSLSTIQRNHSQGNGLGRISGERRPC*

>peptide 2 (43 aa)
MGYNPCFWSQGLLRWADPGGGHCQVGSLAGAAHLLKDNAGVLR*

>peptide 3 (76 aa)
NQRGKKTLLSLTLVQLCEITXNPSAVGGLLELLPRRERFAACWPGDGLGTAPSGAFPGHRTVSSELVRTRGIRLFN*

>peptide 4 (55 aa)
MPRHLISDAHEWINEIPTVPVYYPAKPQPRERAWQNQRGKKTLLSLTLVRLCEMT*

Sequence

>CNT30311486
GAATCAGCGGGGAAAGAAGACCCTGTTGAGCTTGACTCTAGTCCAACTTTGTGAAATAACTTANAACCCGTCGGCTGTCGGTGGACTGCTCGAGCTGCTT
CCGCGGCGAGAGCGGTTCGCTGCGTGCTGGCCGGGGGACGGACTGGGAACGGCTCCTTCGGGAGCTTTCCCCGGGCATCGAACAGTCAGCTCAGAACTGG
TACGGACAAGGGGAATCCGACTGTTTAATTAAAACAAAGCATTGCGATGGTCCTTGCGGATGCTAACGCAATGTGATTTCTGCCCAGTGCTCTGAATGTC
AAAGTGAAGAAATTCAACCAAGCGCGGGTAAACGGCGGGAGTAACTATGACTCTCTTAAGGTAGCCAAATGCCTCGTCATCTAATTAGTGACGCGCATGA
ATGGATTAACGAGATTCCCACTGTCCCTGTCTACTATCCAGCGAAACCACAGCCAAGGGAACGGGCTTGGCAGAATCAGCGGGGAAAGAAGACCCTGTTG
AGCTTGACTCTAGTCCGACTTTGTGAAATGACTTGAGAGGTGTAGGATAAGTGGGAGCTCCGGCGCAAGTGAAATACCACTACTTTTAACGTTATTTTAC
TTACTCCGTGAATCGGAGATGGGGTACAACCCCTGTTTTTGGTCCCAAGGCTTGCTTCGGTGGGCCGATCCGGGCGGAGGACATTGTCAGGTGGGGAGTT
TGGCTGGGGCGGCACATCTGTTAAAAGATAACGCAGGTGTCCTAAGATGAGCTCAACGAGAACAGAAATCTCGTGTGGAACAAAAGGGTAAAAGCTCGTT
TGATTCTGATTTTCAGTACGAATACGAACCGTGAAAGCGTGGCCTATCGATCCTTTAGACCTTCGGAATTTGAAGCTAGAGGTGTCAGAAAAGTTACCAC
AGGGATAACTGGCTTGTGGCGGCCAAGCGTTCATAGCGACGTCGCTTTTTGATCCTTCGATGTCGGCTCTTCCTATCATTGCGAAGCAGAGTTCGCCAAG
CGTTGGATTGTTCACCCACTAATAGGGAACGTGAGCTGGGTT