Detailed information on CNT30311451


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30374088Camelina sativaArabidopsis thaliana70.1565.296.391109forward
CNT30619309Camelina sativaSesamum indicum84.4460.7691.691335reverse complement
CNT30526827Camelina sativaPhaseolus vulgaris80.299.7693.061268reverse complement

Expression of CNT30311451

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MNGLTRFPLSLSTIQRNHSQGNGLGRISGERRPC*

>peptide 2 (49 aa)
MAQPEVGSSGWKSTARRVVSSALPAALENPEDRVPLTPGRTHNRIRSPR*

>peptide 3 (36 aa)
MERCRQGKSAKWIHNFGKRIGSEGWVRGSQFRTRRL*

>peptide 4 (55 aa)
MPRHLISDAHEWINEIPTVPVYYPAKPQPRERAWQNQRGKKTLLSLTLVRLCEMT*

>peptide 5 (53 aa)
MREIQKRIRLKFRNREVAVDGNVRESGDVGRGLGKSYLFCLTACPPWKWLSRR*

Sequence

>CNT30311451
CCAGGCCGTCGGGGCAAGAGCCAGGCCTCGATGAGTAGGAGGGCGCGGCGGTCGCTGTAAAACCTAGGGCGCGAGCCCGGGCGGAGCGGCCGTCGGTGCA
GATCTTGGTGGTAGTAGCAAATATTCAAATGAGAACTTTGAAGGCCGAAGAGGGGAAAGGTTCCATGTGAACGGCACTTGCACATGGGTTAGTCGATCCT
AAGAGTCGGAGGAAACCCGTCTGATAGCGCTTATGCGCGAAATTCAAAAGAGGATCCGGTTAAAATTCCGGAACCGGGAAGTGGCTGTTGACGGCAACGT
TAGGGAGTCCGGAGACGTCGGCAGGGGCCTTGGGAAGAGTTATCTTTTCTGTTTAACAGCCTGCCCACCCTGGAAATGGCTCAGCCGGAGGTAGGATCCA
GCGGCTGGAAGAGCACCGCACGTCGCGTGGTGTCTAGTGCGCTCCCGGCGGCCCTTGAAAATCCGGAGGACCGAGTGCCACTCACGCCCGGTCGTACTCA
TAACCGCATCAGGTCTCCAAGGTGAACAGCCTCTGGTCGATGGAACGATGTAGACAAGGGAAGTCGGCAAAATGGATCCATAACTTCGGGAAAAGGATTG
GCTCTGAGGGCTGGGTCCGGGGATCCCAGTTCCGAACCCGTCGGCTGTAGGCGAACTGCTCGAGCTGCTTCCACGGCAAGAGCGGGTCGCTGCGTGCTGG
CCGGGGGACGGATTGGGAACGGTTTCTTCGGGAACTTTCCCCGGGCATCGAACAGTCAGCTCAAAACTGGTACAGACAAGGGGAATCTGACTGTTTAATT
AAAAAAGCATTGCGATGGTCCTTGCGGATGCTAACGCAATGTGATTTCTGCCCAGTGCTCTGAATGTCAAAGTGAAGAAATTCAACCAAGCGCGGGTAAA
CGGTGGGAGTAACTATGACTCTCTTAAGGTAGCCAAATGCCTCGTCATCTAATTAGTGACGCGCATGAATGGATTAACGAGATTCCCACTGTCCCTGTCT
ACTATCCAGCGAAACCACAGCCAAGGGAACGGGCTTGGCAGAATCAGCGGGGAAAGAAGACCCTGTTGAGCTTGACTCTAGTCCGACTTTGTGAAATGAC
TTGAGAGGTGTAGGATAAGTGGGAGCTCCGGCGCAAGTGAAATACCACTACTTTTAACGTTATTTTACTTACTCCGTGAATCGGAGGCGGGGTACAACCC
CTGTTTTTGGTCCCAAGACTCGCTTCGGCGGGTCGATCCGGGCGGAGGACATTGTCAGGTGGGGAGTTTGGCTGGGGCGGCACATCTGTTAAAAGATAAC
GCAGGTGTCCTAAGATGAGCTCAACGAGAACAGAAATCTCGTGTGGAACAAAAGGGTAAAAGCTCGTTTGATTCTGATTTTCAGTACGAATACGAACCGT
GAAAGCGTGGCCTATCGATCCTTTAGACCTTCGGAATTTGAAGCTAGAGGTGTCAGAAAAGTTACCACAGGGATAACTGGCTTGTGGCGGCCAAGCGTTC
ATAGCGACGTCGCTTTTTGATCCTTCGATGTCGGCTCTTCCTATCATTGCGAAGCAGAGTTCGCCAAGCGTTGGATTGTTC