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Detailed information on CNT30311185


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CH05|UBI2P_PETCR, E-value = 0.0

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30525214Camelina sativaPhaseolus vulgaris82.2556.1181.821089forward
CNT30629221Camelina sativaVigna unguiculata79.2381.8381.891049forward
CNT3097262Camelina sativaSolanum tuberosum83.1696.1681.561101forward
CNT30423866Camelina sativaPapaver somniferum84.8987.8883.451124forward
CNT30120072Camelina sativaCitrus clementina58.1666.2183.12770forward
CNT30334114Camelina sativaCynara cardunculus83.7648.6280.971109forward
CNT30726149Camelina sativaLupinus angustifolius66.8446.4882.94885forward

Expression of CNT30311185

Peptides detected in this lncRNA

>peptide 1 (61 aa)
MSLCWSGGIPSLSWILALTLSIVSELSTSKVMVFPVRVFTKICIPPLRRSTKWRVDSFWIL*

>peptide 2 (98 aa)
LKTCTWIIIKLETYTERFTTKVHITKTQNESDREKSFYLLQKSTSKCTSLNQTTPVLTTDHKLRSLHHEDEEPSEESTPSGCCNPQESDHPQAVSQRR*

Sequence

>CNT30311185
TTTTAAAAACGTGCACTTGGATTATTATTAAACTTGAAACATACACCGAAAGGTTTACGACAAAAGTACATATAACTAAAACACAAAATGAAAGCGATAG
AGAAAAGTCTTTTTATCTTTTGCAGAAATCAACTTCCAAGTGCACGAGTCTCAATCAAACAACACCAGTTTTGACTACAGACCATAAGCTCAGAAGTCTC
CACCACGAAGACGAAGAACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCCGCAAGAGTCCGACCATCCTCAAGCTGTTTCCCAGCGAAGATGAG
TCTCTGTTGGTCCGGAGGGATCCCTTCCTTATCCTGAATCTTTGCCTTGACGTTATCGATTGTGTCTGAGCTCTCTACCTCCAAGGTGATAGTCTTCCCT
GTCAAAGTTTTCACAAAGATTTGCATACCACCACGGAGACGCAACACAAGGTGAAGGGTTGTTTCCTTCTGGATATTGTAATCCGCAAGTGTCCGACCAT
CCTCTAGCTGCTTACCGGCAAAGATGAGTCTCTGCTGGTCCGGTGGGATCCCTTCCTTATCCTGAATCTTAGCCTTGACATTATCGATAGTGTCTGAGCT
CTCAACTTCCAACGTGATAGTCTTCCCTGTCAAAGTTTTCACAAAGATTTGCATACCACCACGGAGACGCAACACAAGGTGAAGGGTTGATTCCTTCTGG
ATGTTGTAATCCGCAAGGGTGCGTCCATCTTCAAGCTGTTTCCCTGCAAAGATGAGCCTCTGCTGGTCTGGTGGGATTCCTTCTTTATCCTGGATCTTAG
CCTTGACATTATCGATAGTGTCTGAACTCTCAACCTCCAAAGTGATGGTCTTTCCGGTCAGGGTCTTCACAAAAATCTGCATACCACCTCTGAGACGAAG
CACCAAGTGGAGAGTAGACTCTTTCTGGATATTGTAGTCAGCTAGCGTGCGACCATCCTCAAGCTGCTTACCGGCAAAGATAAGCCTCTGCTGGTCCGGA
GGAATCCCTTCTTTATCCTGAATCTTAGCTTTAACATTGTCAATAGTATCCGAACTCTCAACCTCGAGGGTGATGGTTTTGCCAGTCAACGTCTTCACAA
AGATTTGCATACCACCTCTTAATCGGAGAACCAAGTGAAGGGTTGATTCTTTCTGAATGTTGTAATCCGCCAAGGTACGACCATCCTCTAGCTGTTTACC
AGCAAAGATCAACCTTTGCTGATCCGGAGGGATCCCTTCCTTGTCCTGAATCTTAGCCTTAACATTGTCGATGGTGTCAGAACTCTCAACCTCGAGAGTA
ATGGTCTTGCCAATCAAAGTTTTC