Detailed information on CNT30310640


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30543929Camelina sativaBrassica napus32.9330.3193.43137forward
CNT30235682Camelina sativaBrassica oleracea33.8927.6593.62141forward
CNT3060687Camelina sativaArabidopsis lyrata40.8743.5991.18170forward
CNT3075281Camelina sativaBrassica juncea47.3645.0891.37197forward
CNT30261673Camelina sativaBrassica rapa47.3617.9790.86197forward
CNT30135839Camelina sativaLolium perenne20.6736.2991.8686forward
CNT30115058Camelina sativaEutrema salsugineum33.8931.8393.62141forward

Expression of CNT30310640

Peptides detected in this lncRNA

>peptide 1 (30 aa)
HLYIRVSKGIYSQLRTISSSLVTVAVKSPI*

Sequence

>CNT30310640
CACCTCTACATTAGGGTTTCCAAGGGTATATATTCACAGTTACGCACCATTTCCTCTTCTCTTGTTACCGTCGCCGTGAAATCGCCGATTTAGGGTTTTG
AGAAAAAGAGTTTCTCCGCCATGAGAGCCAAGTGGAAGAAGAAGCGTATGAGGAGGCTTAAGAGGAAGAGACGAAAGATGAGACAGCGATCTAAGTAGGG
AGAAAGAGGAGACTCATCTTGAAGACTTCGGTTTTTCCATTTCTGCATCCCCTGTCTTTTTCGCTTATATCTTAAGTACTGTTGTCTGAACTCGTTTCAA
GTTTTTAAGTTGTTCTTGGCTTCGTTTTTTGTTGGATTGTATGGATCCTCAAGTAATGTTAAACCTTGATCTATCTAATCAGTTTCTTTATCGATGATGT
TATTATGTTATGCTAA