Detailed information on CNT30309936


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30653503Camelina sativaRosa chinensis12.4421.3498.1554reverse complement
CNT30214655Camelina sativaHelianthus annuus13.1326.2798.2557reverse complement

Expression of CNT30309936

Peptides detected in this lncRNA

>peptide 1 (38 aa)
MSLSESSFDDNTLDVEKIKKRKGRSENRTRDLSHPKRES

>peptide 2 (51 aa)
MRNGLSLRLRESSTPLFHSFGFFGFEFRSLCVSVWLDYRRKMRDRKIKDKG*

Sequence

>CNT30309936
CGNGCGGTGAGTGAGTGTGGAAGACGAAGCACCACCGAAGCGGGAGGGGAATTCGAATGAGGTGGTTCGGGAAGGGAAGTGATTAGCGGAAGCGAGGGTT
GGGTAAGATGAGGAACGGATTGAGCTTGCGATTGAGAGAGTCGTCGACGCCATTGTTTCACTCTTTTGGCTTCTTCGGATTTGAGTTTCGCTCTCTGTGT
GTGAGTGTTTGGTTGGATTATAGGAGGAAGATGAGGGATAGAAAAATAAAAGATAAGGGGTAATTTGGGAAATTATTTAAGGCGTAGGTTTGCTATCATG
CGCGTATAGACATAAATGAGCTTGTCCGAGTCTTCTTTTGACGATAATACCCTTGATGTTGAAAAGATTAAAAAAAGAAAGGGGCGTTCCGAGAATCGAA
CTCGGGACCTCTCGCACCCAAAGCGAGAATCATA