Detailed information on CNT30309525


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30548225Camelina sativaIpomoea triloba73.3724.5796.37303forward
CNT30378677Camelina sativaArabidopsis thaliana97.8214.7499.75404forward
CNT30180581Camelina sativaSecale cereale61.511.4197.64254forward
CNT30390425Camelina sativaTriticum turgidum24.4610.6997.03101forward
CNT30669339Camelina sativaTriticum dicoccoides47.9482.597.47198forward
CNT3081844Camelina sativaBrassica juncea24.9414.74100103forward
CNT30229709Camelina sativaAnanas comosus24.4621.2297.03101forward
CNT30627054Camelina sativaDaucus carota39.9545.7198.18165forward
CNT30689753Camelina sativaTriticum urartu10042.9396.13413forward
CNT30483389Camelina sativaChara braunii27.612.6785.96114forward
CNT30148125Camelina sativaBrachypodium distachyon45.5267.3891.49188forward

Expression of CNT30309525

Peptides detected in this lncRNA

>peptide 1 (44 aa)
IPFRHNMRRGGHRISRYIIVGMSQNIRSIKNPNRKKDSKSYPTN*

Sequence

>CNT30309525
AAATACCATTCCGGCACAATATGAGGCGGGGTGGACATCGGATTAGCAGGTATATAATTGTCGGGATGTCCCAAAACATTAGGAGCATAAAAAATCCAAA
TAGAAAAAAAGATAGCAAAAGCTACCCAACCAACTAGATCCTTGACATAAAAATAAGGGGTAAAAAGCTATTTTATCCATCTCAGAATGTACACCCAATG
GATTATTTGATCCATATTGATGCAATGCGGCCAGATGAAGAAGACTGGCGCCTACTAAAATAAAGGGGAGTAAATGATGAAGACTAAAAAAACGATTTAA
GGTGGCATTGTCCACGGAGAAACCACCCCAAAGCCAAGTCACTATGGTATCTCCTACTACAGGTATGGCGCTAGCTAAGCTTGTAATTACTGTAGCTCCC
CAAAAGCTCATCT