Detailed information on CNT30309523


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30628164Camelina sativaDaucus carota51.8674.4696.58936forward
CNT30680824Camelina sativaTriticum urartu57.4570.5495.661037forward
CNT30705845Camelina sativaPrunus avium49.8154.3996.44899forward

Expression of CNT30309523

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MMRRQHKGHAIRRVIMNHQSNGQSPRRPFI*

>peptide 2 (55 aa)
MHPFQKSGFVARISSRITTVIRVVVTIKQTITDLMSHSQFHSLNSFILTHAWLNL*

>peptide 3 (87 aa)
MLSQLFVFHKSKNFTSDYEIRMPPTVPVNHYSDPEGTSRPVHTERRTGRPIPRFNYELFNCNNLNIRYWSWNYRGCWHQTCPPMDPR*

>peptide 4 (46 aa)
MKYECPRLSLLIITPIPKGRADRCTPKGGPGDPSQGSTTSFLTATT*

>peptide 5 (50 aa)
MIYPHHDEISKITRACRPRCELVEYISVARVRPRTSKGITDLLLPQTSLA*

>peptide 6 (37 aa)
MSGPAAGSTPGGALPSIPLSFSLATILPPEPKNFDFS*

>peptide 7 (43 aa)
MIRFSGLLATSQAANHPRRRDPNTSPDHSIGRSDGRCVQRAGT*

Sequence

>CNT30309523
GATCCTTCCGCAGGTTCACCTACGGAAACCTTGTTACGACTTCTCCTTCCTCTAAATGATAAGGTTTAGTGGACTTCTCGCGACGTCGCAGGCGGCGAAC
CACCCACGTCGCCGCGATCCGAACACTTCACCGGATCATTCAATCGGTAGGAGCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGTCAACGCGAGCTG
ATGACTCGCGCTTACTAGGAATTCCTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTACCCGGGCCTGTCGGCC
AAGGTGTGAACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCTTGGCCTAA
ACGGCCATAGTCCCTCTAAGAAGCCGGCCGTGAAGGGATGCCTCCACGTAGCTAGTTAGCAGGCTGAGGTCTCGTTCGTTAACGGAATTAACCAGACAAA
TCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTCTCAGTCTGTCAATCCTTACTATGTCTGGACCTGCCGCAGGCT
CCACTCCTGGTGGTGCCCTTCCGTCAATTCCTTTAAGTTTCAGCCTTGCGACCATACTCCCCCCGGAACCCAAAAACTTTGATTTCTCATAAGGTGCCAG
CGGAGTCCTAAAAGCAACATCCGCTGATCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGAGCCCCCAACTTTCGTTCT
TGATTAATGAAAACATCCTTGGCAAATGCTTTCGCAGTTGTTCGTCTTTCATAAATCCAAGAATTTCACCTCTGACTATGAAATACGAATGCCCCCGACT
GTCCCTGTTAATCATTACTCCGATCCCGAAGGGACGAGCCGACCGGTGCACACCGAAAGGCGGACCGGGCGACCCATCCCAAGGTTCAACTACGAGCTTT
TTAACTGCAACAACTTAAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAATGGATCCTCGTTAAGGGATTTAGAT
TGTACTCATTCCAATTACCAGACTCGAAAGAGCCCGGTATTGTTATTTATTGTCACTACCTCCCCGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCT
TCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTCACCCGTTACCACCATGGTAGGCCACTATCCTACCATCG
AAAGTTGATAGGGCAGAAATTTGAATGATGCGTCGCCAGCACAAAGGCCATGCGATCCGTCGAGTTATCATGAATCATCAGAGCAACGGGCAGAGCCCGC
GTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACGTATTAGCTCTAGAATTACTACGGTTATCCGAGTAGTAGTTACCAT
CAAACAAACTATAACTGATTTAATGAGCCATTCGCAGTTTCACAGTCTGAATTCGTTCATACTTACACATGCATGGCTTAATCTTTGAGACAAGCATATG
ACTACTGGCAGGATCAACCAGGTAGCAATCATCGATCACGGCGATTCCCCACCACGCTCAAACTAACGCTAAGGAAAGAGAGAACGGACGAGGTCTCGAC
CATCATCTTTTGTCCGAGGGACAGATGTGCTTTGGCGGGACTGAATCGCTTCGAGTCACCGTCCATAACTTTTCCGCATCCGAGATTTCGACCGGCTGCT
TATTC