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Detailed information on CNT30309167


BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 4e-96

BLAST vs NONCODE:
NONMTRT002043, E-value = 1e-65

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30141933Triticum aestivumLolium perenne29.3866.9994.2483forward

Expression of CNT30309167

Peptides detected in this lncRNA

>peptide 1 (73 aa)
MKKLGINKFRIWNLTESTSYAHLDEASQQNRRIGLGHATKRAKSTSHTSLPNRLDRIDTNRRIYSIIESTASY*

>peptide 2 (35 aa)
MLRRQYSVTPSRSMFNNHLKKCTVYESTIITRISD*

>peptide 3 (44 aa)
GADKQQQHRYEELTQITHDIKSSLINHSSPSKATASNRHNRTDQ*

>peptide 4 (61 aa)
MRRCWSGGMPSLSWIFAFTLSMVSEDSTSRVMVLPVRVLTKICIPPRRRSTRWRVDSFWML*

>peptide 5 (31 aa)
MVSDDSTSRVMVLPVRVFTNICICKYKVNPE*

>peptide 6 (73 aa)
MRRLYSLNPSKYMLKLGHSNLDRCNSNNINFRVEQMQTMRLHHEKASSKQIQNQEPKRTQHINLATIVQNQPI*

Sequence

>CNT30309167
GGCGCAGACAAACAGCAGCAGCACAGGTATGAAGAACTGACACAAATTACGCACGATATTAAGAGCTCCCTTATTAATCATAGTTCACCATCCAAAGCCA
CGGCAAGTAATCGACACAACCGAACAGATCAGTAATCGACACAACCGAACAGATCAGTGATGGAAACAACGACACGACCAGACAAGCGCACCTATTGGAG
GACACCGACGACACAAGACCTGTGAACCCAACAGAAGCCACACCGTGACCAGGCACTTACTGGCCACCACGCAGGCGAAGCACCAAGTGAAGGGTAGACT
CCTTCTGGATGTTGTAGTCTGCCAGAGTGCGGCCATCCTCAAGCTGCTTACCAGCAAAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTG
GATCTTCGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACCTCCAGAGTGATGGTCTTGCCCGTCAGGGTCTTGACGAAGATCTGCATACCACCACGA
AGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCT
GGTCCGGGGGGATACCCTCCTTGTCCTAAATCTTCGCCTTGACGTTGTCGATGGTGTCCGATGACTCAACCTCAAGGGTGATGGTCTTGCCGGTGAGGGT
CTTCACAAATATCTGCATCTGTAAATACAAAGTAAACCCAGAGTAAGAAGCAGTTGAAAGGGAACATGCAGGACATAAACAATACAGGTACAGAGAGATG
AAATCCTAGTTACAGATAAACGAACATCTCAATATGAATCTAGTAAAAATCCCAATCTATCAGCACAATCTTAAGCCTGATGAGAAGGCTATATAGTCTA
AATCCTAGCAAATACATGCTCAAATTGGGACACAGCAATCTGGACAGGTGCAACAGTAATAACATAAATTTCAGAGTAGAACAAATGCAAACGATGAGGC
TGCACCATGAGAAAGCTAGTAGTAAACAAATCCAGAATCAAGAACCTAAAAGAACCCAGCATATAAACTTGGCAACAATCGTACAGAACCAACCTATCTA
GCAAAAACTAGAAAAAAACATAACAGATTAAAGTAGTAGCAAAACCTACCAAAAGTTAACAAATCTATCAGCACAATCTTTGGCATGTTGAGAAGGCAAT
ATAGTGTAACTCCTAGCAGATCTATGTTCAACAATCATCTGAAGAAGTGTACGGTATATGAATCAACAATAATAACACGAATTTCAGACTAGACCGACAG
GCAACTACTACAAGGGTGAACCATGAAAAAGTTAGGCATAAATAAATTCAGAATATGGAACCTAACGGAATCAACCAGCTACGCACACCTAGATGAAGCG
AGCCAACAAAATCGGCGCATAGGACTAGGACACGCAACCAAACGAGCGAAATCAACCAGCCACACAAGCCTGCCTAATCGGCTGGACCGAATCGACACCA
ATCGGCGGATCTACTCGATAATCGAATCGACAGCAAGCTATTAACAAGCAATAGCGCCTCAGCGCGCAGATCTACTCCAAACGACGGGTTAACAGAAGAG
TAATCGAGAGGCGGATCGATCGGAAACTCGCGTACCTTGGGGGG