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Detailed information on CNT30309070


BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 4e-96

BLAST vs NONCODE:
NONMTRT002043, E-value = 4e-68

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30441445Triticum aestivumAegilops tauschii45.26100100744forward
CNT30722589Triticum aestivumTriticum spelta44.89100100738forward

Expression of CNT30309070

Peptides detected in this lncRNA

>peptide 1 (44 aa)
GADKQQQHRYEELTQITHDIKSSLINHSSPSKATASNRHNRTDQ*

>peptide 2 (61 aa)
MRRCWSGGMPSLSWIFAFTLSMVSEDSTSRVMVLPVRVLTKICIPPRRRSTRWRVDSFWML*

>peptide 3 (73 aa)
MKKLGINKFRIWNLTESTSYAHLDEASQQNRRIGLGHATKRAKSTSHTSLPNRLDRIDTNRRIYSIIESTASY*

>peptide 4 (73 aa)
MRRLYSLNPSKYMLKLGHSNLDRCNSNNINFRVEQMQTMRLHHEKASSKQIQNQEPKRTQHINLATIVQNQPI*

>peptide 5 (35 aa)
MLRRQYSVTPSRSMFNNHLKKCTVYESTIITRISD*

>peptide 6 (31 aa)
MVSDDSTSRVMVLPVRVFTNICICKYKVNPE*

Sequence

>CNT30309070
GGCGCAGACAAACAGCAGCAGCACAGGTATGAAGAACTGACACAAATTACGCACGATATTAAGAGCTCCCTTATTAATCATAGTTCACCATCCAAAGCCA
CGGCAAGTAATCGACACAACCGAACAGATCAGTAATCGACACAACCGAACAGATCAGTGATGGAAACAACGACACGACCAGACAAGCGCACCTATTGGAG
GACACCGACGACACAAGACCTGTGAACCCAACAGAAGCCACACCGTGACCAGGCACTTACTGGCCACCACGCAGGCGAAGCACCAAGTGAAGGGTAGACT
CCTTCTGGATGTTGTAGTCTGCCAGAGTGCGGCCATCCTCAAGCTGCTTACCAGCAAAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTG
GATCTTCGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACCTCCAGAGTGATGGTCTTGCCCGTCAGGGTCTTGACGAAGATCTGCATACCACCACGA
AGGCGGAGCACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTACGACCATCCTCGAGCTGCTTGCCAGCAAAGATGAGGCGCTGCT
GGTCCGGGGGGATACCCTCCTTGTCCTAAATCTTCGCCTTGACGTTGTCGATGGTGTCCGATGACTCAACCTCAAGGGTGATGGTCTTGCCGGTGAGGGT
CTTCACAAATATCTGCATCTGTAAATACAAAGTAAACCCAGAGTAAGAAGCAGTTGAAAGGGAACATGCAGGACATAAACAATACAGGTACAGAGAGATG
AAATCCTAGTTACAGATAAACGAACATCTCAATATGAATCTAGTAAAAATCCCAATCTATCAGCACAATCTTAAGCCTGATGAGAAGGCTATATAGTCTA
AATCCTAGCAAATACATGCTCAAATTGGGACACAGCAATCTGGACAGGTGCAACAGTAATAACATAAATTTCAGAGTAGAACAAATGCAAACGATGAGGC
TGCACCATGAGAAAGCTAGTAGTAAACAAATCCAGAATCAAGAACCTAAAAGAACCCAGCATATAAACTTGGCAACAATCGTACAGAACCAACCTATCTA
GCAAAAACTAGAAAAAAACATAACAGATTAAAGTAGTAGCAAAACCTACCAAAAGTTAACAAATCTATCAGCACAATCTTTGGCATGTTGAGAAGGCAAT
ATAGTGTAACTCCTAGCAGATCTATGTTCAACAATCATCTGAAGAAGTGTACGGTATATGAATCAACAATAATAACACGAATTTCAGACTAGACCGACAG
GCAACTACTACAAGGGTGAACCATGAAAAAGTTAGGCATAAATAAATTCAGAATATGGAACCTAACGGAATCAACCAGCTACGCACACCTAGATGAAGCG
AGCCAACAAAATCGGCGCATAGGACTAGGACACGCAACCAAACGAGCGAAATCAACCAGCCACACAAGCCTGCCTAATCGGCTGGACCGAATCGACACCA
ATCGGCGGATCTACTCGATAATCGAATCGACAGCAAGCTATTAACAAGCAATAGCGCCTCAGCGCGCAGATCTACTCCAAACGACGGGTTAACAGAAGAG
TAATCGAGAGGCGGATCGATCGGAAACTCGCGTACCTTGGGGGG