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Detailed information on CNT30309040


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT006943, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30710098Triticum aestivumGlycine max44.3959.2491.94186forward
CNT3082954Triticum aestivumBrassica juncea46.5416.5391.28195reverse complement
CNT30609809Triticum aestivumGossypium raimondii65.8764.9489.13276reverse complement
CNT30364730Triticum aestivumSorghum bicolor95.2370.3799399forward
CNT30705531Triticum aestivumPrunus avium66.8310092.14280forward

Expression of CNT30309040

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MFSLLKPTFSLPLRRPPLSRLLPSKAERSPTDAF*

Sequence

>CNT30309040
TTCTTACCCTGAAAAAGCAGGGTCACCTTGTGTCCTTAAACCTATAACCATCTTTCGGCTAACCTAGCCTCCTCCGTCCCTCCGTACCAACAAGGGGTAG
TACAGGAATATTGACCTGTTGTCCATCGACTACGCCTTTCGGCCTGATCTTAGGCCCTGACTCACCCTCCGTGGACGAACCTTGCGGAGGAAACCTTGGG
TTTTCGGGGCATTGGATTCTCACCAATGTTTTCGTTACTCAAGCCGACATTCTCGCTTCCGCTTCGTCGACCCCCGCTTTCGCGGTTGCTTCCCTCTAAG
GCGGAACGCTCCCCTACCGATGCATTTTGACATCCCACAGCTTCGGCAGATCGCTTAGCCCCGTTCATCTTCAGCGCAAGGGCGCTCGATCAGTGAGCTA
TTACGCACTCTTTAAAGGG