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Detailed information on CNT30308821


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30194511Triticum aestivumSecale cereale91.496.4494.141434forward
CNT30444212Triticum aestivumAegilops tauschii54.6865.9599.3858forward
CNT30665732Triticum aestivumTriticum dicoccoides81.978.6497.511285forward

Expression of CNT30308821

Peptides detected in this lncRNA

>peptide 1 (78 aa)
MQRFSEGNLIGTSVQRCPTVLTCTKRATFLFPEPHSAVGSEFHLRRTGDRDSDDVAPGGQRFSGGDIRGTPLRLFTVGR

>peptide 2 (41 aa)
MRPVLLFIVTTSPCQDWVICAPAAFLGCGSRFSGSLSGIEP*

>peptide 3 (55 aa)
MRPSQKSGFVARISSRITTVIRVARTIKQTITDLMSHSQFHSSNWFILAHAWLNL*

>peptide 4 (41 aa)
MRLVANKRSNQPSLRPCRAREDHLHEGVLQGQITRVSHPQQ*

>peptide 5 (38 aa)
PGPRSNYELFNCNNLNIRYWSWNYRGCWHQTCPPMDPR*

>peptide 6 (30 aa)
MMRRRHEGRVIRRVIMNHRINEQSPRQPFI*

Sequence

>CNT30308821
CCCGGCCCAAGGTCCAACTACGAGCTTTTTAACTGCAACAACTTAAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTC
CAATGGATCCTCGTTAAGGGATTTAGATTGTACTCATTCCAATTACCAGACACTAATGCGCCCGGTATTGTTATTTATTGTCACTACCTCCCCGTGTCAG
GATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTCACCCGTCACC
ACCATGGTAGGCCCCTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGATGCGTCGCCGGCACGAAGGCCGTGTGATCCGTCGAGTTATCATG
AATCATCGGATCAACGAGCAGAGCCCGCGTCAGCCTTTTATCTAATAAATGCGCCCCTCCCAGAAGTCGGGGTTTGTTGCACGTATTAGCTCTAGAATTA
CTACGGTTATCCGAGTAGCACGTACCATCAAACAAACTATAACTGATTTAATGAGCCATTCGCAGTTTCACAGTTCAAATTGGTTCATACTTGCACATGC
ATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAGGATCAACCAGGTAGCACGTCCTTGGTGACGCCCAGCACGACCATCGTCCTGCGCTTCCACT
TTCGTGGAAACTCAGAGGCAACAGCCGGGCCGGTTGTCGCTCTTGAGCGGCATAGCTCATCCTCCTTGAGGATCGGCGCAGAGAGTCGCATATCCTACCA
TGTAACTGTGGAGAGGTAGAGGCAACTCCTGTTCCGGTTGTTCTCAATTCAGAGAGCTTTGGGTCGGGTCGAGGCAACCGAAAGGGCCACGACCCTTTAT
CGTCAGCAGCATCCAATACCAAAAGCGGGAGCGAGGTTGCCTTGATAGCAGCGGGCACGTAACGCGCCAGCGCCACGAGGCAACGCCGCAAGCGCTATTT
GGCCGCAGCGGCACACCCAAAGGGCGTCCGCCGCGAGGCAACAATTATCCGAAGCGCCACTTCCCGTAGGTCGGGTACTAGCACGCAAGCACTCTTAATC
CAGCGATTCAAAGCCACACAAGGGACGGGACACGACGCCGGTAGTCGGCCGCAGTACAACGGGGGATCTACCGGCAGACACGGGTCCAAAGCTACTCATG
CGCTTAGTAGCCAACAAGCGGTCAAACCAACCAAGCCTCCGCCCGTGCAGAGCACGGGAGGATCACTTGCACGAAGGCGTCCTGCAAGGCCAAATCACGC
GTGTGTCACACCCGCAGCAATAAAGTTACGAATGCAACGATTTTCCGAAGGCAACTTAATCGGGACGTCGGTGCAACGTTGTCCGACGGTCTTAACGTGC
ACGAAACGGGCTACTTTCCTGTTTCCCGAGCCGCATTCGGCTGTTGGGTCAGAATTTCACTTGAGACGTACAGGGGACCGGGACAGCGATGACGTTGCCC
CCGGGGGGCAACGGTTTTCCGGAGGCGACATTCGAGGCACACCGTTGCGACTGTTTACCGTCGGTCGGA