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Detailed information on CNT30308740


BLAST search results

BLAST vs Swiss-Prot:
sp|P07369|CB2G_SOLLC, E-value = 9e-95

BLAST vs NONCODE:
NONMTRT001605, E-value = 1e-39

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30656190Triticum aestivumTriticum dicoccoides79.1559.4299.48968forward
CNT30689591Triticum aestivumTriticum urartu47.0285.1999.48575forward

Expression of CNT30308740

Peptides detected in this lncRNA

>peptide 1 (47 aa)
MMLQFEPPIMCAVHRSCLDIWLQLAASERQRLTCPGQSLWQTPMRCC*

>peptide 2 (43 aa)
MACTKKPNIENMARRPFLTSFTLSSANASGSSAKPSGSKLPPG*

>peptide 3 (62 aa)
MSLKYKQNYRATYIFLSIKYVYASIHILHGEIHCNICRAIHNTRVNAVTMLSEFLCPSTLQA*

>peptide 4 (33 aa)
MEQHTGYIQDMKQAGRSNHFPKDPCNLHHDVTI*

>peptide 5 (31 aa)
MRYPSTAPMSTTWHAQIARMLCACTRLGLPR*

>peptide 6 (29 aa)
HVSKKIFKSVITQHHNRSKITELAIPVLH*

>peptide 7 (38 aa)
MPLDRQPSPVGRSCPRGRVGRLPHRVGRQQCGTPQQRP*

>peptide 8 (35 aa)
MTLCTTLGLAGVQPYKQTGSPNRQHDHDGRWTIRK*

Sequence

>CNT30308740
CATGTGAGCAAGAAAATATTTAAGAGCGTCATAACACAACATCATAATAGAAGCAAAATTACAGAGCTAGCAATTCCTGTCCTTCACTAATTTATCCATG
CAAAATTACAGAGTTAGCAATTCCTGTCCATAAATACATGTAGCTGCATGCCTCAATCCACCCCGCACAACCTTATAAAAGATGTCCCTAAAATACAAGC
AAAATTATAGAGCTACCTATATATTCCTGTCCATAAAATACGTCTATGCGTCCATCCACATACTTCATGGAGAAATACACTGCAATATCTGCCGAGCCAT
TCACAACACTAGAGTGAACGCTGTCACTATGCTTTCAGAATTCCTTTGCCCTAGTACACTTCAAGCCTAGGTTCAGGGGTGCTCAGTTTTTTCACGAACT
TTCAGAAACATTGCATGCCAATGCATTAGTAAAACTGAACGAAAATGACTCTTTGTACAACTTTGGGGCTGGCCGGCGTTCAACCATACAAGCAAACGGG
CTCTCCGAACAGACAGCATGATCACGATGGTCGATGGACCATAAGAAAATGAGAGCATAAGTTGCCATCACGAAGAGCGACCTCTGACTAAGTAACGCCC
AAGTATTCATCGTTCTCATTTCTCATGGAGCAACACACAGGCTACATCCAGGACATGAAGCAAGCGGGCAGATCAAACCATTTCCCCAAAGATCCTTGTA
ATTTACACCATGATGTTACAATTTGAACCACCCATTATGTGTGCAGTTCACCGCAGTTGCCTTGATATATGGCTACAACTCGCAGCTAGCGAGCGCCAAC
GCCTCACTTGCCCGGGACAAAGTTTGTGGCAAACGCCCATGCGTTGTTGTTGACAGGGTCGGAGAGGTGGTCAGCGAGGTTCTCGAGTGGGCCCTTGCCG
GTGACGATGGCCTGCACGAAGAAGCCAAACATAGAAAACATGGCGAGGCGACCGTTCTTGACTTCCTTCACCTTGAGCTCCGCGAATGCCTCTGGATCGT
CAGCCAAGCCCAGTGGGTCGAAGCTGCCCCCGGGGTAGAGTGGGTCGACTACCTCACCGAGTGGGCCGCCAGCAATGCGGTACCCCTCAACAGCGCCCAT
GAGCACGACTTGGCATGCCCAGATAGCAAGGATGCTTTGTGCGTGCACGAGGCTGGGGTTGCCCAGGTAGTCGAGGCCACCCTCGCTGAAGATCTGGGAA
CCGGCCTTGAACCATACCGCCTC