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Detailed information on CNT30308381


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30371505Triticum aestivumOryza glumipatula67.678.5498.97194forward
CNT30604605Triticum aestivumOryza punctata75.2693.5194.91216reverse complement
CNT30333260Triticum aestivumCynara cardunculus21.258.3691.861forward

Expression of CNT30308381

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MISSWSERMISHTGTETRPRLLREAAVGNFPQWAKA*

>peptide 2 (31 aa)
MGESLTEQCRVEVEGLRVVNFFSRRRNNDGI*

Sequence

>CNT30308381
CTCCGCTTCGCCTAAGGAGGGGCTCGCGTCTGATTAGCTAGTTGGTGAGGTAATAGCTTACCAAGGCGATGATCAGTAGCTGGTCCGAGAGGATGATCAG
CCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAGCAGTGGGGAATTTTCCGCAATGGGCGAAAGCCTGACGGAGCAATGCCGCGTGGAGG
TGGAAGGCCTACGGGTCGTCAACTTCTTTTCTCGGAGAAGAAACAATGACGGTATCTGAGGAATAAGCATTGGCTAACTCTGTGACC