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Detailed information on CNT30308114


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30186386Triticum aestivumSecale cereale13.3522.2295.59136reverse complement
CNT30688390Triticum aestivumTriticum urartu51.0310095520forward

Expression of CNT30308114

Peptides detected in this lncRNA

>peptide 1 (31 aa)
PLTATHSTEREDSDQVKSAVQAVAGGKTGAV*

>peptide 2 (59 aa)
MSRGAEQNATVDCVTQQDGRGRPEVSFSLPGVSEDYSEFCSEKTSASLNNPVGISSSSG*

Sequence

>CNT30308114
GCCGCTCACAGCCACTCATTCCACCGAGAGGGAGGATTCTGACCAGGTAAAATCCGCCGTTCAGGCCGTGGCCGGCGGCAAGACCGGAGCTGTATAGCGC
CGTCCATCTCCGACGCTCTTCTCCGCCCGGAGCTGCCACGGTAGCCACACCCGTCTCCGGCGCTCTGCTCGCTCGCGTCAGGCGCGCTGCGCCACGCCCG
GACGTGGCCTTGGCTGCTGGCGGCAAGACGGTGGCCGTCGCAGCTAGTGCTGCCCACCTCCAGCGCACCCAACGGCAGGCCAAGGTTCTGGCTGAACTTT
GATTCTAACTGACTCGTATCCGAGGACTTGACCCGTTGTGAATTGTGATGGCGACAAGTGATGGAGCGATGAGACGAAGATAAGTTCTTTGCTTTGTTTT
GACCTGGACACGAAGATAAGGCTTTTTGCTTTGTTTTGACCTGGACACGAAGATAAGTTTTTGCTTTGTTTGACCTGGACACGAAGATAAGTTTGATCTC
TACAACCCAAGTGTATGCGTCTTTTTCTTTGAAATGTCTCGAGGAGCGGAACAGAATGCAACTGTGGATTGCGTGACGCAGCAGGACGGGAGAGGCAGAC
CAGAAGTCTCCTTTTCTCTTCCCGGGGTTTCAGAAGACTATTCCGAGTTTTGTTCAGAGAAGACAAGCGCATCTTTGAACAATCCTGTTGGGATAAGCAG
CAGCTCGGGCTAGTACGTCTCATCTGTGCAGAGAAGCATCTTCCAAGATGTCGCCGTTCAGTCGTTCAAAGTACAGGTTAGGGCGGCCGTGAGAATTGTG
GTTGGATTGGATTGGTTATCTTCTACTCTACTCTACTATTTCCGTGACAAAGAATGTGAATGTGAGACGTTGCTGGCTGGCTGCTGTAGCCTATACTGCT
GCTGCTGTTAAGCGGCTGTGTTTTTTTTTTCCTGAACCGAAAACCGTAGAATAATCGTTCTATGGCAAATATATTAAATATTAAAACAAGATACAAAAAG
TTCAGGCAGCATACAACAG