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Detailed information on CNT30308049


BLAST search results

BLAST vs Swiss-Prot:
sp|P00228|FER_WHEAT, E-value = 6e-36

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30695212Triticum aestivumOryza sativa25.342491.07168forward
CNT30192541Triticum aestivumSecale cereale71.7948.9794.33476forward
CNT30226363Triticum aestivumHordeum vulgare49.4768.9192.68328forward
CNT30443354Triticum aestivumAegilops tauschii61.5466.3497.06408forward
CNT30669992Triticum aestivumTriticum dicoccoides72.173.6589.33478forward
CNT30141331Triticum aestivumLolium perenne32.7331.7790.78217forward
CNT30683915Triticum aestivumTriticum urartu73.657.5592.01488forward
CNT30596773Triticum aestivumOryza meridionalis25.3425.4991.67168forward
CNT30370840Triticum aestivumOryza glumipatula25.3423.3391.07168forward
CNT30102906Triticum aestivumOryza rufipogon25.3421.6285.12168forward
CNT30117414Triticum aestivumOryza nivara25.3419.8391.07168forward
CNT30551485Triticum aestivumOryza brachyantha27.1523.1490.56180forward

Expression of CNT30308049

Peptides detected in this lncRNA

>peptide 1 (64 aa)
NQRDSSAIRIHFSTLNYVHASITTVVYLTVQKGNSETLLLDQITHRAIHSSTNKSEYLAMSMHA*

Sequence

>CNT30308049
AATCAGAGAGACTCCTCAGCCATCAGGATTCATTTCAGTACGTTGAATTACGTACACGCTAGTATTACGACAGTAGTATATCTTACGGTACAAAAAGGTA
ATTCGGAGACATTATTACTTGACCAAATCACGCATCGAGCAATTCATTCGAGCACAAACAAATCGGAGTATCTGGCCATGTCAATGCATGCATGATAAGG
AGATAATATGATATCAGCTCGATCTCGTTGCAAAGAGAGATAGGTATAGCAGCTTATGCGGTGAGCTCCTCCTCCTTGTGGGTCTCGATGACGATGTCGG
ACTTGGGGTAGGCGTGGCAGGAGTAGGGCAGGTCGATCCCCTCCTCCTCGGCCTGGTCGAGGATGTAGACGTCGTCGGGGACCTCCAGCTCCACCTCGCC
CTCGGGCGTCACCAGCTTCACCTTGTACGTCGCCTGCGCGCGGAGCCTGGCTCCCCGCACCTGCTTGGCGGCGGCGAGGCTGAGGGCCGCGGGCGCCAGG
GCCACGCGGGGCGCCGGTGGCGCCACGGCGCGCACGGAGAAGGGCGCGCGGAGGCTCAGTGCGGCGGCCATTGGTGGCTAGCTAGCTGGAGCTTGGACGC
TCTTTCTCTGTGTGGCTGAGAAGGTGGAGAGGATAGGCGGGCGAGCTAGGGGATGGAGGAGTG