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Detailed information on CNT30307702


BLAST search results

BLAST vs Swiss-Prot:
sp|Q05968|PR1_HORVU, E-value = 2e-86

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30226328Triticum aestivumHordeum vulgare35.0753.2995.74235forward
CNT30589349Triticum aestivumMusa acuminata12.5425.5385.7184forward
CNT30369249Triticum aestivumOryza glumipatula12.3936.5689.1683forward

Expression of CNT30307702

Peptides detected in this lncRNA

>peptide 1 (39 aa)
MYVCMYVLRRRASQLVWFLSNDIPAGLVVADDAGAADAG*

>peptide 2 (59 aa)
ITVQDGIHGLLRHSFYLLARSLWLVRHTKVHAIRDERLDVCMHVCTAKTCITVSMVSVQ*

Sequence

>CNT30307702
ATTACAGTCCAGGATGGAATACATGGCTTATTACGGCATTCCTTTTATTTACTCGCTCGGTCCCTCTGGCTAGTTAGGCATACGAAGGTGCATGCGATTA
GGGACGAAAGACTAGATGTATGTATGCATGTATGTACTGCGAAGACGTGCATCACAGTTAGTATGGTTTCTGTCCAATGATATTCCCGCGGGGCTCGTAG
TTGCAGACGACGCGGGCGCAGCCGATGCTGGTTGACGCGCGCCACACCACCTGCGTGTAGTGCCCGCACACCTTCCCCGCCGCGCAGGTGTTGGAGCCGT
AGTCGTAGTCCTTCTTTTCGCCCACCCACGCGTTCACCGCGTCCGCCGCCTTCCAGTCCGCGCCGGCCGACCCCCAGAAGATGTTCTCCCCGTACGGCCC
GCCCGAGTGCTGGAGCTTGCAGTCGTTGATCCTCTGGTTGGCGTAGCTCTGGGCGAACCCCTGCAGCTTCGTGCTCCAGCTAACCGCGCCCACCCCGACC
GCGGCGCGGGCAGCGTTGTGAGGTGAGAGGTAGTCCTGCGGCGAGTTCTGCGCCTGGGAAGGGTTAGCCATGGCGGCTGCCATGGCTAGGGCGAGCAAGA
TGGCTAGCTTGGGTGTCTGCATTCTCGATTCGGTCGGTGTCTAAATTAATGATTTCTATGTGCCTGCACT