Detailed information on CNT30306489


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30399706Triticum aestivumTriticum turgidum73.2598.5798.041175forward

Expression of CNT30306489

Peptides detected in this lncRNA

>peptide 1 (59 aa)
MCCIRRWLECFCCEWLYTATGLFFSFSLVFFFWLCSSWMFLDILMVQRLVVFGIIAILI*

>peptide 2 (43 aa)
MGKARAVVGGGEAFSCALLGLWEVPLRPRSRSVRSGTAVAPPP*

>peptide 3 (48 aa)
MTCSSLGKRGWQHLWTAFLVMLLEYRAMIFRVKTQVLAFVGCTCNWPF*

>peptide 4 (42 aa)
MELTEMEKDMVAATKGLFLAERLLVVLKTMLHRFFVSVFDDL*

>peptide 5 (35 aa)
MSRTESMRSCAAFLGKARLFWTSPWDMSSFRFPWS*

Sequence

>CNT30306489
AAGCTTTCCGCATCTCAGTTGGATTACTATATTTATGTGCCACGAGAAAGTACAGATTATATCATGAGTAGAAAATAGTACGGCGTCGTCCGCTCGGGCG
ACACGGGCGGCGGAATCCTAGCCACCGCAGAGGCCATCTCTCCATCAATTCCTCCCTCGCCGCTGCCGGTGGCTGGCATGGGCAAAGCCCGTGCGGTGGT
AGGCGGCGGCGAGGCCTTCTCTTGCGCCCTCCTCGGTTTGTGGGAGGTTCCGCTGCGCCCTCGATCCAGATCTGTTCGTTCTGGGACGGCGGTGGCGCCG
CCTCCTTGAGGAGTTCGCCGGGCGCACGGCTGTGAGGCGAGGCAGAGGAAGCGGCAGGCACGGTGCTGCAGGCCAGAGGCGGAGGCGCGGCCAAGCCCTA
CGGCGGCGGCGCTGAAACCAGCGTGCTTTGCAGTGCTCATGCCTATTTTGTTCAACCTTGTGCTTGTCTGGTCTAGAGGTTGACCCGCTCGATCTCATCG
TCAGGAGTCAGCCGACGGTGTGGGGAGTGCTGGATCGACCAGAATAATGGTGGTTTTGGCCTTGCTGTTCTTCAAGCACTAACTCGTCAATCCACCAAAT
CTGCCTCCTCGATTGGGACCGTCAAGTTCCGTTCTTCCTCTCGGAGATATTCGCAGCTTGTCACAAGATGCTACTGGATGTCTAGAACGGAATCGATGCG
GTCGTGCGCAGCCTTTTTGGGCAAGGCGCGCCTCTTCTGGACGTCACCATGGGACATGTCTTCATTTAGATTTCCATGGAGCTGACAGAGATGGAGAAAG
ACATGGTGGCTGCGACCAAAGGTTTGTTTCTGGCAGAGAGATTGTTGGTTGTGTTGAAGACGATGCTACACAGGTTCTTTGTGTCGGTGTTTGATGACTT
GTAGCAGCCTTGGCAAGCGGGGGTGGCAACACTTGTGGACTGCATTTTTGGTGATGCTCCTCGAGTACCGTGCCATGATTTTCAGGGTGAAAACCCAAGT
TCTGGCCTTCGTTGGTTGTACCTGCAATTGGCCTTTCTGAAGGCATTGTTTTGGAAACTTGGTCTTTCTCCGGAGTGAAAACTCAAGATCTTCGATCGGG
CGACGACAACGCTTGTATTTTGTTTCCTTCTTGGAGGCGTTGCTTTTGGAGAGCCTAGTATGTAATACATGTGTTGTATTCGGAGGTGGTTAGAGTGCTT
CTGTTGCGAGTGGCTATACACTGCGACGGGGCTTTTTTTTTCTTTCTCTCTTGTTTTTTTTTTTTGGTTGTGTTCATCCTGGATGTTTTTGGACATCTTG
ATGGTGCAGAGGCTGGTTGTATTTGGTATCATCGCGATATTAATATAGCCCCTTTTCGAAATATTCCCGCACAACCAAACCAAGCATGCACGCACGGACA
CAAACACCTGAGTCCTATCCAATCAGCGCGTAATCAATTCATTACCCACTAAGCACACCTCCGGAAAGGCCAGATCCCCTTTAATCCCATTGTCTCCACC
AACATACCTACTTGTAATACCGATCGATCGTCCAACCAGCTGACGGCAGGAAAAAGAAAAGACGGAATCCTCCCGATGGATCGAAAACCATGGAGGAAAT
CGAC