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Detailed information on CNT30306352


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30520681Triticum aestivumSetaria italica14.1520.6485.7177forward
CNT30553785Triticum aestivumOryza glaberrima17.4626.1788.4295forward

Expression of CNT30306352

Peptides detected in this lncRNA

>peptide 1 (75 aa)
MSASYKTIFMRILLISCILLPLGFLSLAPPLPAASSRSARTSGYIVISGCNNYCSVACCYCNIHRFPPVCEKCCE*

>peptide 2 (35 aa)
THLPKRTPNNYVYILSCHLKPGVAISLTNQAQHVC*

Sequence

>CNT30306352
CACTCACCTGCCAAAAAGGACACCGAACAACTACGTATATATACTAAGCTGTCATCTTAAGCCTGGTGTTGCTATCAGCTTAACCAATCAAGCTCAACAT
GTCTGCTAGCTACAAGACCATTTTCATGAGGATACTTCTCATCTCTTGCATTCTACTCCCCCTTGGGTTTCTTTCTCTTGCACCACCTCTACCCGCAGCT
AGCTCGAGAAGCGCACGAACGTCTGGGTACATTGTTATCAGTGGTTGCAACAATTACTGCAGCGTGGCCTGCTGCTACTGCAACATCCACAGGTTTCCAC
CTGTTTGTGAAAAGTGCTGCGAGTAATATGAAGTCTTCACTTCCTCCATCTTGGGAACAAGGCAGGAGATACTTCCGGCGTGCTGTCTCGGCATAATTTT
GTAATACATCTGAAAGTCTGAGTTTCAACTACATGGAAACGCCTGAAAACCCTTAAGTTTCAGTCGTGCTGTATATTACTTTTCCGATAACACATTGTGT
TTGTTACTTTGAAGCAACATGATCTGATTCTGGCAATATCAAAC