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Detailed information on CNT30306166


BLAST search results

BLAST vs Swiss-Prot:
sp|P00228|FER_WHEAT, E-value = 5e-46

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30676003Triticum aestivumSetaria viridis62.342.5888.82304forward
CNT30523593Triticum aestivumSetaria italica62.338.3489.14304forward
CNT30227182Triticum aestivumHordeum vulgare84.6343.7595.4413forward
CNT30399991Triticum aestivumTriticum turgidum84.4362.3398.06412forward
CNT30568151Triticum aestivumActinidia chinensis20.0814.7485.7198forward
CNT30256898Triticum aestivumAvena sativa62.536.2791.8305forward
CNT30468260Triticum aestivumSaccharum spontaneum63.1143.9487.99308forward
CNT30140637Triticum aestivumLolium perenne66.1948.1491.95323forward
CNT3010346Triticum aestivumZea mays62.549.5188.2305forward
CNT30343858Triticum aestivumEragrostis tef62.736.6587.91306forward
CNT30366876Triticum aestivumSorghum bicolor56.9751.187.41278forward
CNT30596694Triticum aestivumOryza meridionalis28.8916.7789.36141forward
CNT30357736Triticum aestivumLactuca sativa39.1432.8282.72191forward
CNT30584932Triticum aestivumEchinochloa crusgalli63.1158.4489.61308forward
CNT30497939Triticum aestivumDigitaria exilis63.3239.4687.38309forward
CNT30595007Triticum aestivumEragrostis curvula62.744.6786.27306forward
CNT30558096Triticum aestivumPanicum hallii63.5238.3289.35310forward

Expression of CNT30306166

Peptides detected in this lncRNA

>peptide 1 (31 aa)
LLNILIQFECRAWYTRTVETGRTKQISEFKR*

>peptide 2 (50 aa)
MTRSEVGYAAQVSTHPASIWSSSRKLWSDWSSWPETTFPAQEEQEPARQE*

Sequence

>CNT30306166
CTCCTCAATATCCTGATACAGTTCGAATGTCGTGCATGGTACACGCGCACGGTGGAAACGGGTCGAACTAAACAAATCAGTGAATTCAAGCGGTGAGCTC
CTCCTCCTTGTGGGTCTCGATGACGAGGTCCGAGGTGGGGTACGCGGCGCAGGTGAGCACCCACCCCGCCTCGATCTGGTCGTCGTCGAGGAAGCTCTGG
TCGGACTGGTCCAGCTGGCCGGAGACCACCTTCCCGGCGCAGGAGGAGCAGGAGCCGGCGCGGCAGGAGTAGGGCAGGTCGATCCCCTCCTCCTCGGCCT
GGTCGAGGATGTAGACGTCATCGGGGACCTCCAGCTCCACCTCGCCCTCGGGCGTCACCAGCTTCACCTTGTACGTCGCCTGGGCGCGGAGCCTGGCTCC
CCGCACCTGCTTGGCGGCGGCGAGGCTGAGGGCCGCGGGCGCGAGGGCCACGCGGGGCGCCGGTGGCGCCACGGCGCGCAGGGAGAAG