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Detailed information on CNT30306129


BLAST search results

BLAST vs Swiss-Prot:
sp|Q3BAI2|YCX91_PHAAO, E-value = 2e-14

BLAST vs NONCODE:
NONSLYT003133, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3089926Triticum aestivumSolanum tuberosum28.1915.8797.44351reverse complement
CNT30508923Triticum aestivumSolanum lycopersicum24.1890.1298.01301forward
CNT30258490Triticum aestivumAvena sativa29.450.6998.91366forward
CNT30660235Triticum aestivumTriticum dicoccoides75.5810098.3941reverse complement
CNT3067934Triticum aestivumLeersia perrieri17.9998.2593.75224reverse complement
CNT30320583Triticum aestivumAsparagus officinalis21.4524.3499.63267forward
CNT30118993Triticum aestivumCitrus clementina21.9377.5693.77273forward
CNT30331625Triticum aestivumDioscorea rotundata18.873.5897.44234forward
CNT30151167Triticum aestivumBrachypodium distachyon9.5620.38100119reverse complement
CNT3099709Triticum aestivumOryza rufipogon29.817.04100371forward

Expression of CNT30306129

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MKVVRELGLERRETVWFLSTVGVKGRTARSQP*

Sequence

>CNT30306129
AACGGTTGAAACTTCCAGGAAAAAACTTCGAATTGGGAGGGCGATCCTCCCGGTGAACTGACCGTACCCCAAACCGACACAGGTGAACAAGTAGAGTATA
CTAGGGCGCGTCGAGAGAACCATGTCGAAGGAACTCGGCAAAATGACCCCGTAACTTCGGGAGAAGGGGTGCTCTCCTATCTTTTGATTAGGAAAGCGGC
ACATACCAGGGGGTAGCGACTGTTTATTAAAAACACAGGACTCTGCTAAGTGGTAACACGATGTATAGAGTCTGACACCTGCCCGGTGCTGGAAGGTCGG
AAGGAGAAGTGTGATAAGCTTTGAATGGAAGCCCCGGTAAACGGCGGCAGTAACTCTAACTGTCCTAAGGTAGCGAAATTCCTTGTCGCATAAGTAGCGA
CCTGCACGAATGGTGTAACGACTGCCCCGCTGTCTCCGACATGGACCCGGTGAAATTGAATTCTCCGTGAAGATGCGGAGTACCAACGGCTAGACGGTAA
GACCCCGTGCACCTTGACTATAGCTTCACAGTGACAACCTTGATCGAATGTGTAGGATAGGTGGGAGGTGGTGACACACAACGACCAATCCTGAAAGACC
ACTCTTTCGTCTAAGGATGCCTAACCGCCGCACCGATCATTCAGGGGGGGGACACTGCGAGGTGGGTAGTTTATCTGGGGCGGATGCCTCCTAAAGAGTA
ACGGAGGTGTGCGAAGGTAGGCTCAAGCGTTGATTCTGCTCGTGAGCGTAATGGTATAAGCCTGCCTGACTGTGAGACCGACTAGTCGAACAGAGACGAA
AGTCGGCCATAGTGATCCGGGAGTCCCGTGTGGAAGGGCTCTCGCTCAACGGATCAAAGGTACGCCGGGGATAACAGGCTGATGACTCCCAAGAGCTCTT
ATCGACGGAGTCGTTTGGCACCTCGATGTCGACTCATCACATCCTGGGGTTGAAGAAGGTCCCAAGGGTTCGGTTGTTCGCCGATGAAAGTGGTACGTGA
GTTGGGTTTAGAACGTCGTGAGACAGTTTGGTTCCTATCTACCGTTGGTGTTAAAGGGAGAACTGCGAGGAGCCAGCCCTAGTACGAGAGGACTGGGCTG
GGTCAACCTATGGTGTACCGGTTGTTATGCCAATAGCAGCGCCGGGCAGCTAAGTTGGTATGGAAGAACTGCTGCGCCGCGGGAAATCCTTCTCTATACA
AGTTCTCGTACGAGGTTTTTTAACAGAACTTTGATAGGCGAGAGG