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Detailed information on CNT30306107


BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 3e-98

BLAST vs NONCODE:
NONMEST001181, E-value = 1e-84

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30722781Triticum aestivumTriticum spelta85.1869.33100615forward

Expression of CNT30306107

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MYSTETKTRLANPETEAELHRQELYWPPRRRSTK*

>peptide 2 (41 aa)
QVIHQSATRKHAPKADQMHQKDSKKPQYLTQQQTSCKTNRI*

>peptide 3 (38 aa)
MRRCWSGGMPSLSCIFALTLSMVSEDSTSRVMVLPVRVF

>peptide 4 (61 aa)
MRRCWSGGMPSLSWIFAFTLSMVSDDSTSRVMVLPVRVFTNICMPPRSLSTKWRVDSFWML*

>peptide 5 (91 aa)
MQDKPNLGSLIHSSPKLLHTSRSLKIQTVTLHQCTVQKQRRDLRTQRPKQSSIARSFTGHHGDGAPSEGWTPSGCCSPPRCGHPQAAYRQR*

Sequence

>CNT30306107
TCAAGTCATACACCAGTCAGCAACCAGAAAACATGCGCCAAAAGCAGATCAAATGCACCAGAAAGATAGCAAGAAACCACAGTATTTAACACAACAGCAA
ACATCATGCAAGACAAACCGAATTTAGGCTCACTTATTCATAGTTCACCAAAGCTGCTGCACACCAGCAGAAGTTTGAAGATACAAACGGTAACACTGCA
TCAATGTACAGTACAGAAACAAAGACGAGACTTGCGAACCCAGAGACCGAAGCAGAGCTCCATCGCCAGGAGCTTTACTGGCCACCACGGAGACGGAGCA
CCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCCGCCAAGGTGCGGCCATCCTCAAGCTGCTTACCGGCAAAGATGAGACGCTGCTGGTCCGGGGG
GATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTGTCAATGGTGTCAGACGACTCCACCTCCAGGGTGATGGTCTTGCCAGTGAGGGTCTTCACAAAT
ATCTGCATGCCACCACGGAGCCTGAGCACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGCAAGGGTGCGGCCATCCTCGAGCTGCTTGCCAG
CAAAGATGAGACGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGTATCTTTGCCTTGACATTGTCGATGGTGTCAGAGGACTCAACCTCAAGGGTGAT
GGTCTTGCCAGTAAGGGTCTTC