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Detailed information on CNT30305635


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30730483Triticum aestivumCorchorus capsularis43.7534.9290.26154forward
CNT3045035Triticum aestivumPrunus dulcis27.2714.1293.7596forward
CNT30398533Triticum aestivumTriticum turgidum88.3510099.36311forward
CNT30369893Triticum aestivumOryza glumipatula20.1715.8888.7371forward
CNT30574487Triticum aestivumVitis vinifera33.5219.1289.83118forward
CNT30108418Triticum aestivumOryza longistaminata20.1715.5485.9271forward
CNT30575540Triticum aestivumOryza barthii24.1520.6891.7685reverse complement

Expression of CNT30305635

Peptides detected in this lncRNA

>peptide 1 (44 aa)
MGRNIFTSYIICNCLNLKTFLKPIIYFTHIPEIPKQKNSAVELP*

Sequence

>CNT30305635
GTCATAGAAAAACCGACAGCGACTTGTACTAGAAAACAAGTAAGAGTAATTCCCCCTAGACAATAAAATATGTTGACATGGGAAGGAACATATTTACTAG
TTATATCATCTGCAATTGCCTGAATCTCAAGACGTTCCTCAAACCAATCATATACTTTACTCATATTCCAGAGATACCGAAACAAAAAAATTCCGCGGTC
GAACTACCATAATATCTAGAAATGTAGATCTTAAACTAGAAAGGCTTTTTTGGATGGAAAAACTCTGACTTTCGAGTTTTAGTTAGTAGAAACCTAATTG
GTTAAAATTCCGTCAAGTAAAATGGAATAATTATAAATTTCTAAAATGATAG