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Detailed information on CNT30305412


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30677855Triticum aestivumSetaria viridis21.8912.792.3165forward
CNT30522214Triticum aestivumSetaria italica23.238.8192.7569forward
CNT30226471Triticum aestivumHordeum vulgare57.2442.7186.47170forward
CNT30588421Triticum aestivumMusa acuminata20.5421.6386.8961forward
CNT30662767Triticum aestivumTriticum dicoccoides22.932.6992.6568forward
CNT30445673Triticum aestivumSaccharum spontaneum23.2325.8494.269forward
CNT3015514Triticum aestivumZea mays23.5714.3791.4370forward
CNT3067157Triticum aestivumLeersia perrieri21.8914.0492.3165forward
CNT30361636Triticum aestivumSorghum bicolor23.2318.7594.269forward

Expression of CNT30305412

Peptides detected in this lncRNA

>peptide 1 (73 aa)
DERWNTMGRRLFQATNAAGMNQRALPRTSQMCRDNKLTHSTTRPNENYGRQIITQPTLHPPAECASSCPIAPG*

>peptide 2 (42 aa)
MEHHGQAFIPGNKCGWHEPASTAQDLTNVPRQQINTLHDQTK*

>peptide 3 (29 aa)
MRLFMPHCTGLVAHVLPESIHTGQGHQPL*

Sequence

>CNT30305412
GATGAAAGATGGAACACCATGGGCAGGCGTTTATTCCAGGCAACAAATGCGGCTGGCATGAACCAGCGAGCACTGCCCAGGACCTCACAAATGTGCCGAG
ACAACAAATTAACACACTCCACGACCAGACCAAATGAAAACTACGGCAGACAAATCATAACGCAGCCGACACTTCACCCTCCCGCTGAATGCGCCTCTTC
ATGCCCCATTGCACCGGGCTAGTTGCTCACGTACTTCCAGAATCCATACACACCGGTCAGGGTCATCAGCCTCTCTGAGTACAGCTTCCAGGTGTAC