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Detailed information on CNT30305359


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30187285Triticum aestivumSecale cereale14.6534.3286.61127reverse complement

Expression of CNT30305359

Peptides detected in this lncRNA

>peptide 1 (44 aa)
MLSILCTCICACRAHLLFSCIVEVVAHLCTHIYVPGAPINELRLH

>peptide 2 (39 aa)
PRLRASPTLVGALTSTYATVSCLHEKPILCILLAHTSHE*

>peptide 3 (33 aa)
MQKNNRFIQSLPKNLIEYTKSISEYLSSLRVQS*

>peptide 4 (71 aa)
MRSTFSTKREFYWHIMKHLDDTEQNEHTPGLCVVRMHTQKLRQIAKSYKTKVIRRRGKKTEAIRSAIGKLL*

Sequence

>CNT30305359
CCCAGATTAAGGGCATCTCCAACGCTTGTAGGTGCGTTGACGAGCACCTACGCGACGGTTAGTTGCCTTCACGAGAAGCCAATTTTGTGTATCCTGCTCG
CCCATACATCTCATGAGTGAAGAATGAAATGCAGAAAAACAATAGATTTATTCAAAGTCTTCCCAAGAATCTAATAGAATACACCAAATCGATCTCTGAG
TATCTCAGCTCACTACGTGTTCAAAGTTAATTTACAGAAATACATGTATATAAAACACTCTTCTAAAAAATAAAAAGAAAAAAAAATCTTGCACGGTACA
CCAAAACTTCACAGTAGCGATGAGGTCAACTTTTTCGACAAAGCGTGAATTTTATTGGCACATAATGAAGCATCTAGATGATACAGAACAAAATGAGCAT
ACACCCGGTCTCTGCGTAGTTAGGATGCACACACAGAAACTCCGGCAAATAGCAAAGTCATATAAAACTAAAGTTATCCGTCGGCGAGGAAAAAAAACCG
AAGCGATTAGATCTGCAATCGGCAAACTACTATAACACCATATCTAAATCAATCATCTCATGCCACCACCCGAACAACGAGGTTCTTCAACAACAACGCC
TTGAAAAAAGGAACGATGCTCAAGAGCCACCTTCAAAGGATCCAACCATCTGTGCCCAGAATCTTGGCTTTCACCCTGAAAAACCAGTCCGAGCATATCT
AAGCATTGCCTTCAACAAGGTAACGATGTAAAATGTTGAGTATATTGTGTACGTGTATATGTGCGTGTAGGGCCCACCTCCTGTTTTCTTGTATAGTTGA
GGTTGTGGCCCACCTCTGTACTCATATATACGTGCCTGGTGCACCGATCAATGAATTGCGATTGCAC